RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 TGS1Q96RS0 853 aaKnown RBP12.15□□□□□ -0.46
HDLBP-227ENST00000458564 PDCD2LQ9BRP1 358 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 ZBED2Q9BTP6 218 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 SUGCTQ9HAC7 445 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
HDLBP-227ENST00000458564 LINC01553A4QN01 128 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
HDLBP-227ENST00000458564 CFBP00751 764 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 TGFB3P10600 412 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 HOXC8P31273 242 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 IKBKEQ14164 716 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 CELF3Q5SZQ8 465 aaKnown RBP12.14□□□□□ -0.47
HDLBP-227ENST00000458564 ZNF618Q5T7W0 954 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
HDLBP-227ENST00000458564 SERINC5Q86VE9 423 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 DHX37Q8IY37 1157 aaKnown RBP12.14□□□□□ -0.47
HDLBP-227ENST00000458564 WNT8BQ93098 351 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 UBAC1Q9BSL1 405 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 KRT23Q9C075 422 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
HDLBP-227ENST00000458564 COL4A6Q14031 1691 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 ZBTB5O15062 677 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 PPP1R11O60927 126 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-227ENST00000458564 LGR5O75473 907 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 HTRA4P83105 476 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-227ENST00000458564 NUCB1Q02818 461 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 HIC1Q14526 733 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 SEC23AQ15436 765 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 HSDL1Q3SXM5 330 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
HDLBP-227ENST00000458564 VSIG10LQ86VR7 867 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-227ENST00000458564 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 C16orf70Q9BSU1 422 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 EPHX3Q9H6B9 360 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 INSL6Q9Y581 213 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 SIP14410 1827 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 MYH6P13533 1939 aa12.13□□□□□ -0.47
HDLBP-227ENST00000458564 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-227ENST00000458564 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-227ENST00000458564 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 CAND2O75155 1236 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 GGPS1O95749 300 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
HDLBP-227ENST00000458564 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-227ENST00000458564 TRAF1Q13077 416 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 PGM5Q15124 567 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 IL31RAQ8NI17 732 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 SPATA33Q96N06 139 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 RWDD1Q9H446 243 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-227ENST00000458564 UBE2ZQ9H832 354 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-227ENST00000458564 VAT1LQ9HCJ6 419 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
HDLBP-227ENST00000458564 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 RSPH10B2B2RC85 870 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 GPR37L1O60883 481 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 RSPH10BP0C881 870 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 CCND2P30279 289 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-227ENST00000458564 SP2Q02086 613 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 LEXMQ3ZCV2 418 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 PLEKHG4Q58EX7 1191 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 TMEM31Q5JXX7 168 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 DBF4BQ8NFT6 615 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 C11orf16Q9NQ32 467 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 MTUS1Q9ULD2 1270 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
HDLBP-227ENST00000458564 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 H3BRB1 525 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 STAM2O75886 525 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 AMHP03971 560 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 MYCLP12524 364 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-227ENST00000458564 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-227ENST00000458564 THPOP40225 353 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 SLC35G1Q2M3R5 365 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 B4GALNT3Q6L9W6 998 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDLBP-227ENST00000458564 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDLBP-227ENST00000458564 SAMD11Q96NU1 681 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 INPP4AQ96PE3 977 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-227ENST00000458564 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
HDLBP-227ENST00000458564 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
HDLBP-227ENST00000458564 C17orf102A2RUQ5 167 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 PI4K2BG5E9Z4 385 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 GCOM1H8Y6P7 765 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-227ENST00000458564 LGALS2P05162 132 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 SMIM10L2AP0DMW4 78 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 SMIM10L2BP0DMW5 78 aa12.09□□□□□ -0.47
HDLBP-227ENST00000458564 ICAM3P32942 547 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms