RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ZBED2Q9BTP6 218 aa24.98■■□□□ 1.59
CPNE1-220ENST00000458038 RIOX1Q9H6W3 641 aa24.98■■□□□ 1.59
CPNE1-220ENST00000458038 GCOM1H8Y6P7 765 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-220ENST00000458038 POLR2MP0CAP2 368 aa24.97■■□□□ 1.59
CPNE1-220ENST00000458038 GPNMBQ14956 572 aa24.97■■□□□ 1.59
CPNE1-220ENST00000458038 SART3Q15020 963 aaKnown RBP24.97■■□□□ 1.59
CPNE1-220ENST00000458038 PGM5Q15124 567 aa24.97■■□□□ 1.59
CPNE1-220ENST00000458038 ARNTL2Q8WYA1 636 aa24.97■■□□□ 1.59
CPNE1-220ENST00000458038 LMCD1Q9NZU5 365 aa24.97■■□□□ 1.59
CPNE1-220ENST00000458038 TCF20Q9UGU0 1960 aaKnown RBP24.96■■□□□ 1.59
CPNE1-220ENST00000458038 RFXAPO00287 272 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 PPP1R11O60927 126 aaPredicted RBP24.96■■□□□ 1.59
CPNE1-220ENST00000458038 RGS20O76081 388 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 BMP1P13497 986 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 CCND2P30279 289 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 IKBKEQ14164 716 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 GRM4Q14833 912 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 SPATA33Q96N06 139 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 CERS4Q9HA82 394 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 PTPRSQ13332 1948 aa24.96■■□□□ 1.59
CPNE1-220ENST00000458038 EMSYQ7Z589 1322 aa24.95■■□□□ 1.58
CPNE1-220ENST00000458038 PNMA6FA0A0J9YX94 578 aa24.95■■□□□ 1.58
CPNE1-220ENST00000458038 IFIT3O14879 490 aaKnown RBP24.95■■□□□ 1.58
CPNE1-220ENST00000458038 STAM2O75886 525 aa24.95■■□□□ 1.58
CPNE1-220ENST00000458038 ZNF286BP0CG31 522 aa24.95■■□□□ 1.58
CPNE1-220ENST00000458038 TTC22Q5TAA0 569 aa24.95■■□□□ 1.58
CPNE1-220ENST00000458038 RAD9AQ99638 391 aa24.95■■□□□ 1.58
CPNE1-220ENST00000458038 NBNO60934 754 aa24.94■■□□□ 1.58
CPNE1-220ENST00000458038 GGPS1O95749 300 aa24.94■■□□□ 1.58
CPNE1-220ENST00000458038 HOXA13P31271 388 aaPredicted RBP24.94■■□□□ 1.58
CPNE1-220ENST00000458038 RALYLQ86SE5 291 aaKnown RBP24.94■■□□□ 1.58
CPNE1-220ENST00000458038 HOMER1Q86YM7 354 aa24.94■■□□□ 1.58
CPNE1-220ENST00000458038 IL25Q9H293 177 aa24.94■■□□□ 1.58
CPNE1-220ENST00000458038 MLXIPQ9HAP2 919 aa24.94■■□□□ 1.58
CPNE1-220ENST00000458038 EPOPA6NHQ4 379 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 GJB5O95377 273 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 CYP21A2P08686 494 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 TRIM71Q2Q1W2 868 aaKnown RBP24.93■■□□□ 1.58
CPNE1-220ENST00000458038 HSDL1Q3SXM5 330 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 GNPTABQ3T906 1256 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 NCOA7Q8NI08 942 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 PIGSQ96S52 555 aa24.93■■□□□ 1.58
CPNE1-220ENST00000458038 BRWD1Q9NSI6 2320 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 ARHGEF15O94989 841 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 TROAPQ12815 778 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 GRB10Q13322 594 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 WTAPQ15007 396 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 ZNF618Q5T7W0 954 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 SERINC5Q86VE9 423 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 C16orf70Q9BSU1 422 aa24.92■■□□□ 1.58
CPNE1-220ENST00000458038 GSPT1P15170 499 aaKnown RBP24.91■■□□□ 1.58
CPNE1-220ENST00000458038 UBA1P22314 1058 aaKnown RBP24.91■■□□□ 1.58
CPNE1-220ENST00000458038 DEFB103AP81534 67 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 SP2Q02086 613 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 TFF2Q03403 129 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 TRAF7Q6Q0C0 670 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 CATIPQ7Z7H3 387 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 FCHSD1Q86WN1 690 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 HLA-CQ95604 372 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 USP26Q9BXU7 913 aa24.91■■□□□ 1.58
CPNE1-220ENST00000458038 H3BRB1 525 aa24.9■■□□□ 1.58
CPNE1-220ENST00000458038 LGR5O75473 907 aa24.9■■□□□ 1.58
CPNE1-220ENST00000458038 CHMLP26374 656 aa24.9■■□□□ 1.58
CPNE1-220ENST00000458038 NEDD9Q14511 834 aa24.9■■□□□ 1.58
CPNE1-220ENST00000458038 IL31RAQ8NI17 732 aa24.9■■□□□ 1.58
CPNE1-220ENST00000458038 YTHDC1Q96MU7 727 aaKnown RBP24.9■■□□□ 1.58
CPNE1-220ENST00000458038 TGS1Q96RS0 853 aaKnown RBP24.9■■□□□ 1.58
CPNE1-220ENST00000458038 MAP3K14Q99558 947 aa24.9■■□□□ 1.58
CPNE1-220ENST00000458038 TUT1Q9H6E5 874 aaKnown RBP24.9■■□□□ 1.58
CPNE1-220ENST00000458038 RSPH10B2B2RC85 870 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 CYTH3O43739 400 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 LPXNO60711 386 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 CAND2O75155 1236 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 RSPH10BP0C881 870 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 PDE4AP27815 886 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 ICAM3P32942 547 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 ERVK-21P61565 698 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 SLC35G1Q2M3R5 365 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 INSL6Q9Y581 213 aa24.89■■□□□ 1.58
CPNE1-220ENST00000458038 KAT6AQ92794 2004 aa24.89■■□□□ 1.57
CPNE1-220ENST00000458038 FRMPD4Q14CM0 1322 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 C17orf102A2RUQ5 167 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 LCHNA4D1U4 455 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 E7EWF7 191 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 NOP56O00567 594 aaKnown RBP24.88■■□□□ 1.57
CPNE1-220ENST00000458038 GNAT1P11488 350 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 COL9A1P20849 921 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 SMARCA1P28370 1054 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 HOXC8P31273 242 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 ZNF200P98182 395 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-220ENST00000458038 PTH1RQ03431 593 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 XRRA1Q6P2D8 792 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 ATP6V0A1Q93050 837 aa24.88■■□□□ 1.57
CPNE1-220ENST00000458038 INPP4AQ96PE3 977 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-220ENST00000458038 MICAL3Q7RTP6 2002 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 THPOP40225 353 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 KCNQ1P51787 676 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 MBTPS1Q14703 1052 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 KRT40Q6A162 431 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 METTL7BQ6UX53 244 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms