RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 LENG9Q96B70 501 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 CDHR1Q96JP9 859 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 SENP7Q9BQF6 1050 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 WDR11Q9BZH6 1224 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 MYH9P35579 1960 aaKnown RBP13.39□□□□□ -0.27
TRAPPC12-212ENST00000457845 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 TXNP10599 105 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 GCFC2P16383 781 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 CAPN2P17655 700 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 CNGA1P29973 690 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 SP2Q02086 613 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 Q4G0T1 1027 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 KCNH7Q9NS40 1196 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 MRVI1Q9Y6F6 885 aa13.38□□□□□ -0.27
TRAPPC12-212ENST00000457845 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 ATP9AO75110 1047 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 SGPL1O95470 568 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 ARP10275 920 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 KCNA2P16389 499 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 DDIT3P35638 169 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 ZNF76P36508 570 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 TOB1P50616 345 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 GJA9P57773 515 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 SETQ01105 290 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 MTMR1Q13613 665 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 BRAPQ7Z569 592 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 OGDHLQ9ULD0 1010 aa13.37□□□□□ -0.27
TRAPPC12-212ENST00000457845 WNT7AO00755 349 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 CTAGE5O15320 804 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 ADAMTS4O75173 837 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 TDP2O95551 362 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 RARBP10826 455 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 UBA1P22314 1058 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 GJA8P48165 433 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 ARHGAP1Q07960 439 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 RESTQ13127 1097 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 ORC2Q13416 577 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 GNL2Q13823 731 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 NEDD9Q14511 834 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 LY6KQ17RY6 165 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 LETM2Q2VYF4 491 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 COPS5Q92905 334 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 DEFB118Q96PH6 123 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 AGO4Q9HCK5 861 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 NFASCO94856 1347 aa13.36□□□□□ -0.27
TRAPPC12-212ENST00000457845 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 SCN10AQ9Y5Y9 1956 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 TBX3O15119 743 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 MSH4O15457 936 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 DHX15O43143 795 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 CCNT1O60563 726 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 GH1P01241 217 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 PRR16Q569H4 304 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 CELF3Q5SZQ8 465 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 GJC2Q5T442 439 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 TNS4Q8IZW8 715 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 GIMAP8Q8ND71 665 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 KLHDC9Q8NEP7 349 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 ETNPPLQ8TBG4 499 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 LENG1Q96BZ8 264 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 ZSCAN16Q9H4T2 348 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 SYNRGQ9UMZ2 1314 aa13.35□□□□□ -0.27
TRAPPC12-212ENST00000457845 A6NJR5 290 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 IPO5O00410 1097 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 DYNC1LI2O43237 492 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 SLC37A4O43826 429 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 BRD1O95696 1058 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 GGPS1O95749 300 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 ZSCAN22P10073 491 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 PTGS1P23219 599 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 ITGB3BPQ13352 177 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 LAMC2Q13753 1193 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 PKP1Q13835 747 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 TTC38Q5R3I4 469 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 METTL7BQ6UX53 244 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms