RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 FBXO11Q86XK2 927 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 MCF2L2Q86YR7 1114 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 STAG2Q8N3U4 1231 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 IL31RAQ8NI17 732 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 HLA-CQ95604 372 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 PDCD2LQ9BRP1 358 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 IL25Q9H293 177 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 SP2Q02086 613 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 LAMC2Q13753 1193 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
LMCD1-206ENST00000456506 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
LMCD1-206ENST00000456506 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 RAD9AQ99638 391 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 ALG1Q9BT22 464 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 OSBPL7Q9BZF2 842 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 KAT14Q9H8E8 782 aa13.88□□□□□ -0.19
LMCD1-206ENST00000456506 MRPL11Q9Y3B7 192 aaKnown RBP13.88□□□□□ -0.19
LMCD1-206ENST00000456506 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
LMCD1-206ENST00000456506 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
LMCD1-206ENST00000456506 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
LMCD1-206ENST00000456506 HTRA4P83105 476 aaPredicted RBP13.87□□□□□ -0.19
LMCD1-206ENST00000456506 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 SERINC5Q86VE9 423 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 VSIG10LQ86VR7 867 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 C7orf31Q8N865 590 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 GPKOWQ92917 476 aaPredicted RBP eCLIP13.87□□□□□ -0.19
LMCD1-206ENST00000456506 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 KATNAL1Q9BW62 490 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 BCAS3Q9H6U6 928 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
LMCD1-206ENST00000456506 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 WDR81Q562E7 1941 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 PLXNA4Q9HCM2 1894 aa13.87□□□□□ -0.19
LMCD1-206ENST00000456506 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 LGR5O75473 907 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 CFBP00751 764 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 PGM5Q15124 567 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 PLEKHG4Q58EX7 1191 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 CELF3Q5SZQ8 465 aaKnown RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 VAT1LQ9HCJ6 419 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 MAP3K20Q9NYL2 800 aaKnown RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
LMCD1-206ENST00000456506 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 MTUS1Q9ULD2 1270 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 FRMPD4Q14CM0 1322 aa13.86□□□□□ -0.19
LMCD1-206ENST00000456506 TTC3P53804 2025 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 EFCAB14O75071 495 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 IGHDP01880 384 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
LMCD1-206ENST00000456506 NUCB1Q02818 461 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 IKBKEQ14164 716 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 DBF4BQ8NFT6 615 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.85□□□□□ -0.19
LMCD1-206ENST00000456506 FAM122AQ96E09 287 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 C17orf80Q9BSJ5 609 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 ZBED2Q9BTP6 218 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 UBE2ZQ9H832 354 aaPredicted RBP13.85□□□□□ -0.19
LMCD1-206ENST00000456506 TRIOO75962 3097 aa13.85□□□□□ -0.19
LMCD1-206ENST00000456506 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 PI4K2BG5E9Z4 385 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 ZBTB5O15062 677 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 CYTH3O43739 400 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 GPR37L1O60883 481 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 GGPS1O95749 300 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
LMCD1-206ENST00000456506 COL19A1Q14993 1142 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 LEXMQ3ZCV2 418 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 B4GALNT3Q6L9W6 998 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 RIOX1Q9H6W3 641 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 TELO2Q9Y4R8 837 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 WDFY4Q6ZS81 3184 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 EMSYQ7Z589 1322 aa13.84□□□□□ -0.19
LMCD1-206ENST00000456506 SORBS3O60504 671 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 TGFB3P10600 412 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 MYCLP12524 364 aaPredicted RBP13.83□□□□□ -0.2
LMCD1-206ENST00000456506 ADAM17P78536 824 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 MRPS9P82933 396 aaKnown RBP13.83□□□□□ -0.2
LMCD1-206ENST00000456506 SEMA3FQ13275 785 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 IMMTQ16891 758 aaKnown RBP13.83□□□□□ -0.2
LMCD1-206ENST00000456506 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 FAM178BQ8IXR5 827 aa13.83□□□□□ -0.2
LMCD1-206ENST00000456506 ZFP91Q96JP5 570 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms