RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 HDAC6Q9UBN7 1215 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 NOD1Q9Y239 953 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 ZBBXA8MT70 800 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 HAS3O00219 553 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 MEIS2O14770 477 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 IQCF3P0C7M6 154 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 MYOGP15173 224 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 ZNF200P98182 395 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-204ENST00000455790 MFSD10Q14728 455 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 KIAA0753Q2KHM9 967 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 TMTC3Q6ZXV5 915 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 RPUSD2Q8IZ73 545 aaKnown RBP13.78□□□□□ -0.2
PDGFB-204ENST00000455790 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 WNT8BQ93098 351 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
PDGFB-204ENST00000455790 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
PDGFB-204ENST00000455790 NKX2-4Q9H2Z4 354 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 SEC63Q9UGP8 760 aaKnown RBP13.78□□□□□ -0.2
PDGFB-204ENST00000455790 GTF2IRD1Q9UHL9 959 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 SLC12A7Q9Y666 1083 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 GBF1Q92538 1859 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
PDGFB-204ENST00000455790 CDC45O75419 566 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 GNAQP50148 359 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 BFSP2Q13515 415 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 GPNMBQ14956 572 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 UBE2SQ16763 222 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 SGMS1Q86VZ5 419 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDGFB-204ENST00000455790 TMTC2Q8N394 836 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 USP38Q8NB14 1042 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 SLC4A7Q9Y6M7 1214 aa13.77□□□□□ -0.21
PDGFB-204ENST00000455790 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 PIK3CDO00329 1044 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 DLL1O00548 723 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 PFKMP08237 780 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 CALM1P0DP23 149 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 CALM2P0DP24 149 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 CALM3P0DP25 149 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 TGFB3P10600 412 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 ATP2A2P16615 1042 aaKnown RBP13.76□□□□□ -0.21
PDGFB-204ENST00000455790 RFC2P35250 354 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 EXOSC10Q01780 885 aaKnown RBP13.76□□□□□ -0.21
PDGFB-204ENST00000455790 RAB30Q15771 203 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 TCTN1Q2MV58 587 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 TRIM71Q2Q1W2 868 aaKnown RBP13.76□□□□□ -0.21
PDGFB-204ENST00000455790 KCNV1Q6PIU1 500 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 C7orf31Q8N865 590 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 NEK1Q96PY6 1258 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 C16orf70Q9BSU1 422 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 KATNAL1Q9BW62 490 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 REV3LO60673 3130 aa13.76□□□□□ -0.21
PDGFB-204ENST00000455790 SPTBN5Q9NRC6 3674 aaKnown RBP13.76□□□□□ -0.21
PDGFB-204ENST00000455790 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 MYH7BA7E2Y1 1941 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 SPATA31C2B4DYI2 1134 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 ICAM3P32942 547 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 RBL2Q08999 1139 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 PCNX4Q63HM2 1172 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 TRAF7Q6Q0C0 670 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 LRRC8DQ7L1W4 858 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 AFAP1L1Q8TED9 768 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 CUL5Q93034 780 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDGFB-204ENST00000455790 MLXIPQ9HAP2 919 aa13.75□□□□□ -0.21
PDGFB-204ENST00000455790 DOCK5Q9H7D0 1870 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 FIBPO43427 364 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 NBNO60934 754 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 ARHGEF15O94989 841 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 LGALS2P05162 132 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 CKBP12277 381 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 CPA1P15085 419 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 SELPP16109 830 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 SP4Q02446 784 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 FUT2Q10981 343 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 TYW1BQ6NUM6 668 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 HEATR3Q7Z4Q2 680 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
PDGFB-204ENST00000455790 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms