RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 HSP90AA4PQ58FG1 418 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
PKP4-206ENST00000452162 CDKAL1Q5VV42 579 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 APTXQ7Z2E3 356 aaKnown RBP12.05□□□□□ -0.48
PKP4-206ENST00000452162 SMYD4Q8IYR2 804 aaPredicted RBP12.05□□□□□ -0.48
PKP4-206ENST00000452162 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 COA7Q96BR5 231 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 MTMR8Q96EF0 704 aa12.05□□□□□ -0.48
PKP4-206ENST00000452162 C16orf45Q96MC5 204 aaPredicted RBP12.05□□□□□ -0.48
PKP4-206ENST00000452162 BIN2Q9UBW5 565 aaPredicted RBP12.05□□□□□ -0.48
PKP4-206ENST00000452162 PNMA6FA0A0J9YX94 578 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 CCNT1O60563 726 aaKnown RBP12.04□□□□□ -0.48
PKP4-206ENST00000452162 GTF2F1P35269 517 aaKnown RBP eCLIP12.04□□□□□ -0.482e-13■■■■□ 19.6
PKP4-206ENST00000452162 GCLCP48506 637 aaPredicted RBP12.04□□□□□ -0.48
PKP4-206ENST00000452162 COG2Q14746 738 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 JAKMIP3Q5VZ66 844 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 TTBK2Q6IQ55 1244 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
PKP4-206ENST00000452162 AK8Q96MA6 479 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 RBPJLQ9UBG7 517 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 DYNC1I1O14576 645 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 RPN1P04843 607 aaKnown RBP12.04□□□□□ -0.48
PKP4-206ENST00000452162 CTGFP29279 349 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 UBA7P41226 1012 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 KLHL10Q6JEL2 608 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 KCTD1Q719H9 257 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 LRRC15Q8TF66 581 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 PAGR1Q9BTK6 254 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
PKP4-206ENST00000452162 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 EDIL3O43854 480 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 CNMDO75829 334 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 BMP3P12645 472 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 TNNT1P13805 278 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 CDK11BP21127 795 aaKnown RBP12.03□□□□□ -0.48
PKP4-206ENST00000452162 DSG3P32926 999 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 SLC1A4P43007 532 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 STX17P56962 302 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 LACTBP83111 547 aaPredicted RBP12.03□□□□□ -0.48
PKP4-206ENST00000452162 FAM110CQ1W6H9 321 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 Q3C1V9 767 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 COL13A1Q5TAT6 717 aaPredicted RBP12.03□□□□□ -0.48
PKP4-206ENST00000452162 ZNF658Q5TYW1 1059 aaPredicted RBP12.03□□□□□ -0.48
PKP4-206ENST00000452162 RRAGBQ5VZM2 374 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 TMX1Q9H3N1 280 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 RIC8AQ9NPQ8 531 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 KBTBD4Q9NVX7 518 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 HOXC10Q9NYD6 342 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 CTNND2Q9UQB3 1225 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 MYL1P05976 194 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 NR1I3Q14994 352 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 E4F1Q66K89 784 aaPredicted RBP12.03□□□□□ -0.48
PKP4-206ENST00000452162 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 BTBD7Q9P203 1132 aa12.03□□□□□ -0.48
PKP4-206ENST00000452162 SLC16A2P36021 539 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.49
PKP4-206ENST00000452162 LBX2Q6XYB7 198 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 CABP7Q86V35 215 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 CCDC112Q8NEF3 446 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 DCAF4Q8WV16 495 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 ERO1AQ96HE7 468 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 MTMR9Q96QG7 549 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 SLF1Q9BQI6 1058 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 MAGEF1Q9HAY2 307 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 PPP1R9AQ9ULJ8 1098 aa12.02□□□□□ -0.49
PKP4-206ENST00000452162 ZBTB5O15062 677 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 KLRC4O43908 158 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 PLCG1P19174 1290 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 ERVK-24P63145 666 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 KCNB1Q14721 858 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 SPECC1LQ69YQ0 1117 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 MMTAG2Q9BU76 263 aaKnown RBP12.01□□□□□ -0.49
PKP4-206ENST00000452162 RWDD2AQ9UIY3 292 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 RABGAP1Q9Y3P9 1069 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
PKP4-206ENST00000452162 NRDCO43847 1150 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 PSMC4P43686 418 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 PAK1Q13153 545 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 TMEM139Q8IV31 216 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 RASSF8Q8NHQ8 419 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 GTF3C2Q8WUA4 911 aaPredicted RBP12.01□□□□□ -0.49
PKP4-206ENST00000452162 KIFC2Q96AC6 838 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 TRMT1Q9NXH9 659 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms