RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TET1Q8NFU7 2136 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 HAS3O00219 553 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 STAM2O75886 525 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 GGPS1O95749 300 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 PBX2P40425 430 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 CHMP4BP1P59074 171 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
CPSF4-208ENST00000452047 USP17L6PQ6QN14 398 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 OTOP2Q7RTS6 562 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 RPUSD2Q8IZ73 545 aaKnown RBP14.39□□□□□ -0.11
CPSF4-208ENST00000452047 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 PBX4Q9BYU1 374 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 MTIF3Q9H2K0 278 aaKnown RBP14.39□□□□□ -0.11
CPSF4-208ENST00000452047 GTF2IRD1Q9UHL9 959 aa14.39□□□□□ -0.11
CPSF4-208ENST00000452047 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 SORBS3O60504 671 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 PPFIA4O75335 1185 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 PFKMP08237 780 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 ICAM3P32942 547 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 PSEN2P49810 448 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 SEMA3FQ13275 785 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 PTGISQ16647 500 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 DHX32Q7L7V1 743 aaKnown RBP14.38□□□□□ -0.11
CPSF4-208ENST00000452047 SLC17A8Q8NDX2 589 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 TIFAQ96CG3 184 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 SPATA33Q96N06 139 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 BCAS3Q9H6U6 928 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 CNTNAP5Q8WYK1 1306 aa14.38□□□□□ -0.11
CPSF4-208ENST00000452047 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
CPSF4-208ENST00000452047 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 RFC2P35250 354 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 RBL2Q08999 1139 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 FUT2Q10981 343 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 BFSP2Q13515 415 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 KRT32Q14532 448 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 MFSD10Q14728 455 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 GRIN2CQ14957 1233 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 GNPTABQ3T906 1256 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 PCNX4Q63HM2 1172 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 DEFB128Q7Z7B8 93 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 CAGE1Q8TC20 777 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 DHX38Q92620 1227 aaKnown RBP14.37□□□□□ -0.11
CPSF4-208ENST00000452047 KCNB2Q92953 911 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 CUL5Q93034 780 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 C16orf70Q9BSU1 422 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 ZNF576Q9H609 170 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 HDAC6Q9UBN7 1215 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 PTPRSQ13332 1948 aa14.37□□□□□ -0.11
CPSF4-208ENST00000452047 FIBPO43427 364 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 XRRA1Q6P2D8 792 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 ALG1Q9BT22 464 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 RBM28Q9NW13 759 aaKnown RBP14.36□□□□□ -0.11
CPSF4-208ENST00000452047 RTEL1Q9NZ71 1219 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 CUL9Q8IWT3 2517 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 XIRP2A4UGR9 3374 aa14.36□□□□□ -0.11
CPSF4-208ENST00000452047 ZBTB43O43298 467 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 HOXC8P31273 242 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 RCAN1P53805 252 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 HIC1Q14526 733 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 GPNMBQ14956 572 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 RAB30Q15771 203 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 UBE2SQ16763 222 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 RTN1Q16799 776 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 METTL7BQ6UX53 244 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 SYNE3Q6ZMZ3 975 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 CCDC155Q8N6L0 562 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 RETREG2Q8NC44 543 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 AFAP1L1Q8TED9 768 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 YBX2Q9Y2T7 364 aaKnown RBP14.35□□□□□ -0.11
CPSF4-208ENST00000452047 SLC4A7Q9Y6M7 1214 aa14.35□□□□□ -0.11
CPSF4-208ENST00000452047 KLF18A0A0U1RQI7 1052 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 LGALS2P05162 132 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 HMGB1P09429 215 aaKnown RBP14.34□□□□□ -0.11
CPSF4-208ENST00000452047 CKBP12277 381 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 FOSL2P15408 326 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 SELPP16109 830 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 HSPA4P34932 840 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 NEDD9Q14511 834 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
CPSF4-208ENST00000452047 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 TYW1BQ6NUM6 668 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 CYFIP1Q7L576 1253 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 MAFAQ8NHW3 353 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-208ENST00000452047 WNT8BQ93098 351 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 GPR20Q99678 358 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 SENP7Q9BQF6 1050 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms