RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 IL31RAQ8NI17 732 aa24.91■■□□□ 1.58
C9orf3-208ENST00000451893 EMID1Q96A84 441 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-208ENST00000451893 ZFP91Q96JP5 570 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-208ENST00000451893 GAS2L1Q99501 681 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-208ENST00000451893 CXXC1Q9P0U4 656 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-208ENST00000451893 SCN5AQ14524 2016 aa24.91■■□□□ 1.58
C9orf3-208ENST00000451893 TRIP12Q14669 1992 aaPredicted RBP24.91■■□□□ 1.58
C9orf3-208ENST00000451893 TANC1Q9C0D5 1861 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 PITPNM1O00562 1244 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 TGFB3P10600 412 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 SMARCA1P28370 1054 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 PBX2P40425 430 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 MFSD10Q14728 455 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 NECTIN1Q15223 517 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 RASIP1Q5U651 963 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 MICU3Q86XE3 530 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 CAGE1Q8TC20 777 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 SLC28A3Q9HAS3 691 aa24.9■■□□□ 1.58
C9orf3-208ENST00000451893 DLL1O00548 723 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 STAM2O75886 525 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 PLEKHA8P1O95397 391 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 FGD1P98174 961 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 KIAA0753Q2KHM9 967 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 CELF3Q5SZQ8 465 aaKnown RBP24.89■■□□□ 1.58
C9orf3-208ENST00000451893 CCDC82Q8N4S0 544 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 NEK1Q96PY6 1258 aa24.89■■□□□ 1.58
C9orf3-208ENST00000451893 GBF1Q92538 1859 aa24.89■■□□□ 1.57
C9orf3-208ENST00000451893 UBA1P22314 1058 aaKnown RBP24.88■■□□□ 1.57
C9orf3-208ENST00000451893 GRIN2CQ14957 1233 aa24.88■■□□□ 1.57
C9orf3-208ENST00000451893 GDF6Q6KF10 455 aaPredicted RBP24.88■■□□□ 1.57
C9orf3-208ENST00000451893 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.88■■□□□ 1.57
C9orf3-208ENST00000451893 CMTR1Q8N1G2 835 aaKnown RBP24.88■■□□□ 1.57
C9orf3-208ENST00000451893 USP26Q9BXU7 913 aa24.88■■□□□ 1.57
C9orf3-208ENST00000451893 RTEL1Q9NZ71 1219 aa24.88■■□□□ 1.57
C9orf3-208ENST00000451893 HDAC6Q9UBN7 1215 aa24.88■■□□□ 1.57
C9orf3-208ENST00000451893 NAP1L2Q9ULW6 460 aaPredicted RBP24.88■■□□□ 1.57
C9orf3-208ENST00000451893 LAMA2P24043 3122 aaKnown RBP24.87■■□□□ 1.57
C9orf3-208ENST00000451893 PPFIA4O75335 1185 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 IQCF3P0C7M6 154 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 ATP2A2P16615 1042 aaKnown RBP24.87■■□□□ 1.57
C9orf3-208ENST00000451893 NEDD9Q14511 834 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 MYSM1Q5VVJ2 828 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 USP17L6PQ6QN14 398 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 SESTD1Q86VW0 696 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 SRBD1Q8N5C6 995 aaKnown RBP24.87■■□□□ 1.57
C9orf3-208ENST00000451893 AFAP1L1Q8TED9 768 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 KAT2BQ92831 832 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 NKX2-4Q9H2Z4 354 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 GTF2IRD1Q9UHL9 959 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 MYO9BQ13459 2157 aa24.87■■□□□ 1.57
C9orf3-208ENST00000451893 RGS20O76081 388 aa24.86■■□□□ 1.57
C9orf3-208ENST00000451893 KRT32Q14532 448 aa24.86■■□□□ 1.57
C9orf3-208ENST00000451893 HSDL1Q3SXM5 330 aa24.86■■□□□ 1.57
C9orf3-208ENST00000451893 NLRX1Q86UT6 975 aa24.86■■□□□ 1.57
C9orf3-208ENST00000451893 PSTPIP2Q9H939 334 aa24.86■■□□□ 1.57
C9orf3-208ENST00000451893 COL6A3P12111 3177 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 SPDYE3A6NKU9 549 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 FIBPO43427 364 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 F2P00734 622 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 KCNJ6P48051 423 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 HEATR3Q7Z4Q2 680 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 FANCBQ8NB91 859 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 IL27Q8NEV9 243 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 EHMT1Q9H9B1 1298 aa24.85■■□□□ 1.57
C9orf3-208ENST00000451893 RBM28Q9NW13 759 aaKnown RBP24.85■■□□□ 1.57
C9orf3-208ENST00000451893 SELPP16109 830 aa24.84■■□□□ 1.57
C9orf3-208ENST00000451893 RABGGTBP53611 331 aa24.84■■□□□ 1.57
C9orf3-208ENST00000451893 PPP2R2DQ66LE6 453 aa24.84■■□□□ 1.57
C9orf3-208ENST00000451893 LRRC8DQ7L1W4 858 aa24.84■■□□□ 1.57
C9orf3-208ENST00000451893 GPKOWQ92917 476 aaPredicted RBP eCLIP24.84■■□□□ 1.57
C9orf3-208ENST00000451893 DOCK5Q9H7D0 1870 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 hCG_1642624A0A1W2PR95 340 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 KIF28PB7ZC32 967 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 PARNO95453 639 aaKnown RBP24.83■■□□□ 1.57
C9orf3-208ENST00000451893 SP2Q02086 613 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 SP4Q02446 784 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 XRRA1Q6P2D8 792 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 TMTC3Q6ZXV5 915 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 CYFIP1Q7L576 1253 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 SLC9A7Q96T83 725 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 PRDM12Q9H4Q4 367 aa24.83■■□□□ 1.57
C9orf3-208ENST00000451893 PIK3CDO00329 1044 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 ZBTB43O43298 467 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 IGFBP4P22692 258 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 RTN1Q16799 776 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 PCNX4Q63HM2 1172 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 DHX32Q7L7V1 743 aaKnown RBP24.82■■□□□ 1.56
C9orf3-208ENST00000451893 SGMS1Q86VZ5 419 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 PPM1EQ8WY54 764 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 TCEANC2Q96MN5 208 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 IPO9Q96P70 1041 aaKnown RBP24.82■■□□□ 1.56
C9orf3-208ENST00000451893 ZNF215Q9UL58 517 aaPredicted RBP24.82■■□□□ 1.56
C9orf3-208ENST00000451893 PCDHA11Q9Y5I1 949 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 FRMPD4Q14CM0 1322 aa24.82■■□□□ 1.56
C9orf3-208ENST00000451893 C17orf102A2RUQ5 167 aa24.81■■□□□ 1.56
C9orf3-208ENST00000451893 HMGB1P09429 215 aaKnown RBP24.81■■□□□ 1.56
C9orf3-208ENST00000451893 MRPS9P82933 396 aaKnown RBP24.81■■□□□ 1.56
C9orf3-208ENST00000451893 PTK7Q13308 1070 aa24.81■■□□□ 1.56
C9orf3-208ENST00000451893 METTL7BQ6UX53 244 aa24.81■■□□□ 1.56
C9orf3-208ENST00000451893 GIMAP8Q8ND71 665 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms