RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 MFSD14CQ5VZR4 134 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 SEPT14Q6ZU15 432 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 ARMC5Q96C12 935 aa11.21□□□□□ -0.61
CCDC171-203ENST00000449575 XBP1P17861 261 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 PKP1Q13835 747 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 INF2Q27J81 1249 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 ZSCAN23Q3MJ62 389 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.62
CCDC171-203ENST00000449575 PIK3AP1Q6ZUJ8 805 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.62
CCDC171-203ENST00000449575 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.62
CCDC171-203ENST00000449575 MYH15Q9Y2K3 1946 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 SORBS3O60504 671 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 CCL5P13501 91 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 ITGB5P18084 799 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 KRT2P35908 639 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 SREBF1P36956 1147 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 ARHGAP4P98171 946 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 SEMA3FQ13275 785 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 AP3B2Q13367 1082 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 TRIM29Q14134 588 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 STXBP2Q15833 593 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 COPS5Q92905 334 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 MAF1Q9H063 256 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 FAM86B2P0C5J1 330 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 SYT1P21579 422 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 SP2Q02086 613 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 PCNX4Q63HM2 1172 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 MSL3Q8N5Y2 521 aaKnown RBP11.2□□□□□ -0.62
CCDC171-203ENST00000449575 BICD2Q8TD16 824 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 RNF208Q9H0X6 261 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 TELO2Q9Y4R8 837 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 TCHHQ07283 1943 aa11.2□□□□□ -0.62
CCDC171-203ENST00000449575 FOSP01100 380 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-203ENST00000449575 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
CCDC171-203ENST00000449575 GJA10Q969M2 543 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC171-203ENST00000449575 GLT8D2Q9H1C3 349 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-203ENST00000449575 SMPD1P17405 629 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 CCND2P30279 289 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 FERMT3Q86UX7 667 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-203ENST00000449575 DEFB118Q96PH6 123 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
CCDC171-203ENST00000449575 PAK6Q9NQU5 681 aaPredicted RBP11.19□□□□□ -0.62
CCDC171-203ENST00000449575 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 ATP9AO75110 1047 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 TDP2O95551 362 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 ARP10275 920 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 LHX8Q68G74 356 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 CAVIN1Q6NZI2 390 aaKnown RBP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 ABHD8Q96I13 439 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 INPP4AQ96PE3 977 aaPredicted RBP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 PKD2L1Q9P0L9 805 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 H3BQV1 296 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 SEPT4O43236 478 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 ATP2B1P20020 1258 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 GTF2F1P35269 517 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC171-203ENST00000449575 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 CCDC62Q6P9F0 684 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 UBIAD1Q9Y5Z9 338 aa11.18□□□□□ -0.62
CCDC171-203ENST00000449575 MYADML2A6NDP7 307 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 PGK1P00558 417 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 KRT25Q7Z3Z0 450 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 FAM177A1Q8N128 213 aaPredicted RBP11.17□□□□□ -0.62
CCDC171-203ENST00000449575 LENG9Q96B70 501 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 MTMR6Q9Y217 621 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 TNRC18O15417 2968 aaPredicted RBP11.17□□□□□ -0.62
CCDC171-203ENST00000449575 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 SLC37A4O43826 429 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 TXNP10599 105 aaKnown RBP11.17□□□□□ -0.62
CCDC171-203ENST00000449575 U2AF2P26368 475 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCDC171-203ENST00000449575 TNFAIP2Q03169 654 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
CCDC171-203ENST00000449575 LETM2Q2VYF4 491 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 MXRA8Q9BRK3 442 aa11.17□□□□□ -0.62
CCDC171-203ENST00000449575 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
CCDC171-203ENST00000449575 GNEQ9Y223 722 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms