RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 GGPS1O95749 300 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 AMHP03971 560 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 CCND2P30279 289 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 HSD17B4P51659 736 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 ZNF618Q5T7W0 954 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 SAMD3Q8N6K7 520 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 CTAGE1Q96RT6 745 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 PDCD2LQ9BRP1 358 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 CHD7Q9P2D1 2997 aa23.16■■□□□ 1.3
UBE2F-215ENST00000441728 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
UBE2F-215ENST00000441728 ERICH2A1L162 156 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 ZBTB5O15062 677 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 PLA2G5P39877 138 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 THPOP40225 353 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 CELF3Q5SZQ8 465 aaKnown RBP23.15■■□□□ 1.3
UBE2F-215ENST00000441728 SPRED2Q7Z698 418 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 PLEKHM2Q8IWE5 1019 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 SMC5Q8IY18 1101 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 OSBPL3Q9H4L5 887 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 INSL6Q9Y581 213 aa23.15■■□□□ 1.3
UBE2F-215ENST00000441728 GCOM1H8Y6P7 765 aaPredicted RBP23.14■■□□□ 1.29
UBE2F-215ENST00000441728 HAS3O00219 553 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 NOP56O00567 594 aaKnown RBP23.14■■□□□ 1.29
UBE2F-215ENST00000441728 POLR2MP0CAP2 368 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 HOXA13P31271 388 aaPredicted RBP23.14■■□□□ 1.29
UBE2F-215ENST00000441728 ERVK-21P61565 698 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 GPNMBQ14956 572 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 MYOCDQ8IZQ8 938 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 STAG2Q8N3U4 1231 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 FBXO22Q8NEZ5 403 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 SUGCTQ9HAC7 445 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 MYH7BA7E2Y1 1941 aa23.14■■□□□ 1.29
UBE2F-215ENST00000441728 C17orf102A2RUQ5 167 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 LINC01553A4QN01 128 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 RSPH10B2B2RC85 870 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 LPXNO60711 386 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 RSPH10BP0C881 870 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 TGFB3P10600 412 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 ZNF200P98182 395 aaPredicted RBP23.13■■□□□ 1.29
UBE2F-215ENST00000441728 PGM5Q15124 567 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 GNPTABQ3T906 1256 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 TMEM31Q5JXX7 168 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 MYSM1Q5VVJ2 828 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 ATP6V0A1Q93050 837 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 PTPRSQ13332 1948 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 NCOR1O75376 2440 aa23.13■■□□□ 1.29
UBE2F-215ENST00000441728 NUCB1Q02818 461 aa23.12■■□□□ 1.29
UBE2F-215ENST00000441728 HSDL1Q3SXM5 330 aa23.12■■□□□ 1.29
UBE2F-215ENST00000441728 STOX1Q6ZVD7 989 aa23.12■■□□□ 1.29
UBE2F-215ENST00000441728 EPHX3Q9H6B9 360 aa23.12■■□□□ 1.29
UBE2F-215ENST00000441728 UBA1P22314 1058 aaKnown RBP23.11■■□□□ 1.29
UBE2F-215ENST00000441728 PTPROQ16827 1216 aa23.11■■□□□ 1.29
UBE2F-215ENST00000441728 TRIM71Q2Q1W2 868 aaKnown RBP23.11■■□□□ 1.29
UBE2F-215ENST00000441728 VSIG10LQ86VR7 867 aa23.11■■□□□ 1.29
UBE2F-215ENST00000441728 DBF4BQ8NFT6 615 aa23.11■■□□□ 1.29
UBE2F-215ENST00000441728 SEPT8Q92599 483 aa23.11■■□□□ 1.29
UBE2F-215ENST00000441728 UBE2ZQ9H832 354 aaPredicted RBP23.11■■□□□ 1.29
UBE2F-215ENST00000441728 H3BRB1 525 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 GNAT1P11488 350 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 GHRHRQ02643 423 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 SART3Q15020 963 aaKnown RBP23.1■■□□□ 1.29
UBE2F-215ENST00000441728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.1■■□□□ 1.29
UBE2F-215ENST00000441728 RALYLQ86SE5 291 aaKnown RBP23.1■■□□□ 1.29
UBE2F-215ENST00000441728 SERINC5Q86VE9 423 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 YME1L1Q96TA2 773 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 TUT1Q9H6E5 874 aaKnown RBP23.1■■□□□ 1.29
UBE2F-215ENST00000441728 MAD2L2Q9UI95 211 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 MUC3AQ02505 3323 aa23.1■■□□□ 1.29
UBE2F-215ENST00000441728 OPLAHO14841 1288 aa23.09■■□□□ 1.29
UBE2F-215ENST00000441728 IFIT3O14879 490 aaKnown RBP23.09■■□□□ 1.29
UBE2F-215ENST00000441728 HOXD8P13378 290 aaPredicted RBP23.09■■□□□ 1.29
UBE2F-215ENST00000441728 TCTN1Q2MV58 587 aa23.09■■□□□ 1.29
UBE2F-215ENST00000441728 WNT8BQ93098 351 aa23.09■■□□□ 1.29
UBE2F-215ENST00000441728 SAMD11Q96NU1 681 aa23.09■■□□□ 1.29
UBE2F-215ENST00000441728 PIGSQ96S52 555 aa23.09■■□□□ 1.29
UBE2F-215ENST00000441728 LRFN3Q9BTN0 628 aa23.09■■□□□ 1.29
UBE2F-215ENST00000441728 SMIM10L2AP0DMW4 78 aa23.08■■□□□ 1.29
UBE2F-215ENST00000441728 SMIM10L2BP0DMW5 78 aa23.08■■□□□ 1.29
UBE2F-215ENST00000441728 KCNA5P22460 613 aa23.08■■□□□ 1.29
UBE2F-215ENST00000441728 IL31RAQ8NI17 732 aa23.08■■□□□ 1.29
UBE2F-215ENST00000441728 MTMR8Q96EF0 704 aa23.08■■□□□ 1.29
UBE2F-215ENST00000441728 ZFP91Q96JP5 570 aaPredicted RBP23.08■■□□□ 1.29
UBE2F-215ENST00000441728 C17orf80Q9BSJ5 609 aa23.08■■□□□ 1.29
UBE2F-215ENST00000441728 ZNF215Q9UL58 517 aaPredicted RBP23.08■■□□□ 1.29
UBE2F-215ENST00000441728 SIP14410 1827 aa23.08■■□□□ 1.28
UBE2F-215ENST00000441728 PALM3A6NDB9 673 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-215ENST00000441728 PPP1R11O60927 126 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-215ENST00000441728 RGS20O76081 388 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 UPP2O95045 317 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 LGALS2P05162 132 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 CTSHP09668 335 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 SSTR3P32745 418 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-215ENST00000441728 NEDD9Q14511 834 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 MBTPS1Q14703 1052 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 GRM4Q14833 912 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 SEC23AQ15436 765 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 EP400NLQ6ZTU2 488 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 RUFY2Q8WXA3 655 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 C16orf70Q9BSU1 422 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms