RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 DBF4BQ8NFT6 615 aa24.06■■□□□ 1.44
TRIM39-210ENST00000440271 PXMP2Q9NR77 195 aa24.06■■□□□ 1.44
TRIM39-210ENST00000440271 SIP14410 1827 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 PPFIA4O75335 1185 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 HOXD8P13378 290 aaPredicted RBP24.05■■□□□ 1.44
TRIM39-210ENST00000440271 HTRA4P83105 476 aaPredicted RBP24.05■■□□□ 1.44
TRIM39-210ENST00000440271 MKRN4PQ13434 485 aaPredicted RBP24.05■■□□□ 1.44
TRIM39-210ENST00000440271 CCDC178Q5BJE1 867 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 MYOCDQ8IZQ8 938 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 MRPL38Q96DV4 380 aaKnown RBP24.05■■□□□ 1.44
TRIM39-210ENST00000440271 KAT14Q9H8E8 782 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 VAT1LQ9HCJ6 419 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 MUC6Q6W4X9 2439 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 EMSYQ7Z589 1322 aa24.05■■□□□ 1.44
TRIM39-210ENST00000440271 GRXCR2A6NFK2 248 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 RSPH10B2B2RC85 870 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 DHX16O60231 1041 aaKnown RBP24.04■■□□□ 1.44
TRIM39-210ENST00000440271 CFBP00751 764 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 RSPH10BP0C881 870 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 ASPRV1Q53RT3 343 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 MYSM1Q5VVJ2 828 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 IQCA1Q86XH1 822 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 SP7Q8TDD2 431 aaPredicted RBP24.04■■□□□ 1.44
TRIM39-210ENST00000440271 ANKS1AQ92625 1134 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 JMJD4Q9H9V9 463 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 CTNNA3Q9UI47 895 aa24.04■■□□□ 1.44
TRIM39-210ENST00000440271 PIEZO1Q92508 2521 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 ZNF213O14771 459 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 KDM4AO75164 1064 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 RGS20O76081 388 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 ALADP13716 330 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 THPOP40225 353 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 PUS10Q3MIT2 529 aaKnown RBP24.03■■□□□ 1.44
TRIM39-210ENST00000440271 SERINC5Q86VE9 423 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 NEK9Q8TD19 979 aa24.03■■□□□ 1.44
TRIM39-210ENST00000440271 SORBS3O60504 671 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 NT5C2P49902 561 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 HSD17B4P51659 736 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 PTPROQ16827 1216 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 HSDL1Q3SXM5 330 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 EPC2Q52LR7 807 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 CELF3Q5SZQ8 465 aaKnown RBP24.02■■□□□ 1.44
TRIM39-210ENST00000440271 SPATA33Q96N06 139 aa24.02■■□□□ 1.44
TRIM39-210ENST00000440271 TRIM6-TRIM34B2RNG4 842 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 OPLAHO14841 1288 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 PARP1P09874 1014 aaKnown RBP24.01■■□□□ 1.43
TRIM39-210ENST00000440271 MYCLP12524 364 aaPredicted RBP24.01■■□□□ 1.43
TRIM39-210ENST00000440271 PLEKHG4Q58EX7 1191 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 KCNV1Q6PIU1 500 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 ALYREFQ86V81 257 aaKnown RBP24.01■■□□□ 1.43
TRIM39-210ENST00000440271 SAMD11Q96NU1 681 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 ZSCAN10Q96SZ4 725 aaPredicted RBP24.01■■□□□ 1.43
TRIM39-210ENST00000440271 PDCD2LQ9BRP1 358 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 C16orf70Q9BSU1 422 aa24.01■■□□□ 1.43
TRIM39-210ENST00000440271 H3BQ06 376 aaPredicted RBP24■■□□□ 1.43
TRIM39-210ENST00000440271 GGPS1O95749 300 aa24■■□□□ 1.43
TRIM39-210ENST00000440271 MFAP1P55081 439 aaKnown RBP24■■□□□ 1.43
TRIM39-210ENST00000440271 GHRHRQ02643 423 aa24■■□□□ 1.43
TRIM39-210ENST00000440271 ENAHQ8N8S7 591 aaPredicted RBP24■■□□□ 1.43
TRIM39-210ENST00000440271 RILPL2Q969X0 211 aa24■■□□□ 1.43
TRIM39-210ENST00000440271 UIMC1Q96RL1 719 aa24■■□□□ 1.43
TRIM39-210ENST00000440271 AMNQ9BXJ7 453 aa24■■□□□ 1.43
TRIM39-210ENST00000440271 MYH7BA7E2Y1 1941 aa24■■□□□ 1.43
TRIM39-210ENST00000440271 B4E1Z4 1266 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 H3BNC9 293 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 SP2Q02086 613 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 TIGD5Q53EQ6 642 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 STOX1Q6ZVD7 989 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 VSIG10LQ86VR7 867 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 BANK1Q8NDB2 785 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 ATP6V0A1Q93050 837 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 TOP1MTQ969P6 601 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 MAP3K20Q9NYL2 800 aaKnown RBP23.99■■□□□ 1.43
TRIM39-210ENST00000440271 ZSWIM5Q9P217 1185 aa23.99■■□□□ 1.43
TRIM39-210ENST00000440271 C17orf102A2RUQ5 167 aa23.98■■□□□ 1.43
TRIM39-210ENST00000440271 GPM6BQ13491 265 aa23.98■■□□□ 1.43
TRIM39-210ENST00000440271 SEPT8Q92599 483 aa23.98■■□□□ 1.43
TRIM39-210ENST00000440271 YME1L1Q96TA2 773 aa23.98■■□□□ 1.43
TRIM39-210ENST00000440271 H3BRB1 525 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 UPP2O95045 317 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 TGFB3P10600 412 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 SDSP20132 328 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 PGM5Q15124 567 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 CSPP1Q1MSJ5 1256 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 TCEAL5Q5H9L2 206 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 MICAL3Q7RTP6 2002 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 TMEM192Q8IY95 271 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 STAG2Q8N3U4 1231 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 PABPC5Q96DU9 382 aaKnown RBP23.97■■□□□ 1.43
TRIM39-210ENST00000440271 OSBPL7Q9BZF2 842 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 TUT1Q9H6E5 874 aaKnown RBP23.97■■□□□ 1.43
TRIM39-210ENST00000440271 MLXIPQ9HAP2 919 aa23.97■■□□□ 1.43
TRIM39-210ENST00000440271 POTEB3A0JP26 581 aa23.96■■□□□ 1.43
TRIM39-210ENST00000440271 PPP1R11O60927 126 aaPredicted RBP23.96■■□□□ 1.43
TRIM39-210ENST00000440271 SMIM10L2AP0DMW4 78 aa23.96■■□□□ 1.43
TRIM39-210ENST00000440271 SMIM10L2BP0DMW5 78 aa23.96■■□□□ 1.43
TRIM39-210ENST00000440271 UBA1P22314 1058 aaKnown RBP23.96■■□□□ 1.43
TRIM39-210ENST00000440271 HOXA13P31271 388 aaPredicted RBP23.96■■□□□ 1.43
TRIM39-210ENST00000440271 HOXC8P31273 242 aa23.96■■□□□ 1.43
TRIM39-210ENST00000440271 POTEBQ6S5H4 581 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms