RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 SEPT14Q6ZU15 432 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 PLA2G4DQ86XP0 818 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 FOXD4L4Q8WXT5 416 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 MBOAT7Q96N66 472 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZNF396Q96N95 335 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 KATNBL1Q9H079 304 aa11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-259ENST00000438510 RBM47A0AV96 593 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 SPATA31C2B4DYI2 1134 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 NKRFO15226 690 aaKnown RBP eCLIP11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 NEMFO60524 1076 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 BMP15O95972 392 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZNF865P0CJ78 1059 aaPredicted RBP11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 AKR1A1P14550 325 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 ITGB5P18084 799 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 MCM7P33993 719 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 IQSEC1Q6DN90 963 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 TAPT1Q6NXT6 567 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 GIMAP8Q8ND71 665 aaPredicted RBP11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 SH3TC2Q8TF17 1288 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZFP91Q96JP5 570 aaPredicted RBP11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 WDR11Q9BZH6 1224 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 KCNH7Q9NS40 1196 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 CEP131Q9UPN4 1083 aa11.97□□□□□ -0.49
HLA-DMB-259ENST00000438510 LAD1O00515 517 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 TBX3O15119 743 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 SEPT4O43236 478 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 EDIL3O43854 480 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 MARCH6O60337 910 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 MSCO60682 206 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 RGS20O76081 388 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 TXNP10599 105 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 CNGA1P29973 690 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 TOB1P50616 345 aaPredicted RBP11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 TRIM32Q13049 653 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 NEDD9Q14511 834 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 CALCRLQ16602 461 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 PRAMEF19Q5SWL8 479 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 SLFN12Q8IYM2 578 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 CYP2W1Q8TAV3 490 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 LENG9Q96B70 501 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 SENP7Q9BQF6 1050 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 SDF4Q9BRK5 362 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZNF577Q9BSK1 485 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 AGO4Q9HCK5 861 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 HMX1Q9NP08 348 aaPredicted RBP11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 TCEAL9Q9UHQ7 104 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 ZDHHC9Q9Y397 364 aa11.96□□□□□ -0.49
HLA-DMB-259ENST00000438510 MYH9P35579 1960 aaKnown RBP11.96□□□□□ -0.5
HLA-DMB-259ENST00000438510 IPO5O00410 1097 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 SLC37A4O43826 429 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 ARP10275 920 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 UBA1P22314 1058 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 NBR1Q14596 966 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 ZNF174Q15697 407 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 DUSP28Q4G0W2 176 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 TRPV1Q8NER1 839 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 ARMC5Q96C12 935 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 FAM20AQ96MK3 541 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 PDGFCQ9NRA1 345 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 TBC1D22BQ9NU19 505 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 PCDHB6Q9Y5E3 794 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 LOXHD1Q8IVV2 1947 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 HTTP42858 3142 aa11.95□□□□□ -0.5
HLA-DMB-259ENST00000438510 NFASCO94856 1347 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 WNT7AO00755 349 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 MSH4O15457 936 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 GH1P01241 217 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 OR52Z1P0C646 297 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 RARBP10826 455 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 KCNA2P16389 499 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 CCND3P30281 292 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 KRT85P78386 507 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 SF3A1Q15459 793 aaKnown RBP11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 LRCH2Q5VUJ6 765 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 ANO1Q5XXA6 986 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 FAM173BQ6P4H8 233 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 CCDC62Q6P9F0 684 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 ETNPPLQ8TBG4 499 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 SLC5A5Q92911 643 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 RIT2Q99578 217 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 TEKT3Q9BXF9 490 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 MCOLN1Q9GZU1 580 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 SPC25Q9HBM1 224 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
HLA-DMB-259ENST00000438510 DDX20Q9UHI6 824 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms