RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 RAPGEFL1Q9UHV5 662 aa10.3□□□□□ -0.76
CTDSPL-205ENST00000436654 RFXAPO00287 272 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 PRC1O43663 620 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 F2P00734 622 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 SELPP16109 830 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 COL9A3Q14050 684 aaPredicted RBP10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 GPNMBQ14956 572 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 KCNV1Q6PIU1 500 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 CASC1Q6TDU7 716 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 LRRC8DQ7L1W4 858 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 RAB11FIP4Q86YS3 637 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 SAMD3Q8N6K7 520 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 CTCFLQ8NI51 663 aaPredicted RBP10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 WNT8BQ93098 351 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 SLC9A7Q96T83 725 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 KATNAL1Q9BW62 490 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 LSG1Q9H089 658 aaKnown RBP10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 MLXIPQ9HAP2 919 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 RTEL1Q9NZ71 1219 aa10.29□□□□□ -0.76
CTDSPL-205ENST00000436654 CHD9Q3L8U1 2897 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 HAS3O00219 553 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 SLC27A2O14975 620 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 PPFIA4O75335 1185 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 ARHGEF15O94989 841 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 PLEKHA8P1O95397 391 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 CKBP12277 381 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 HOXD8P13378 290 aaPredicted RBP10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 RXRAP19793 462 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 KCNJ6P48051 423 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 MRPS9P82933 396 aaKnown RBP10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 PTK7Q13308 1070 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 HIC1Q14526 733 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 TCTN1Q2MV58 587 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 USP17L6PQ6QN14 398 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 TMCO2Q7Z6W1 182 aaPredicted RBP10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 HERC6Q8IVU3 1022 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 CMTR1Q8N1G2 835 aaKnown RBP10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 ESYT1Q9BSJ8 1104 aa10.28□□□□□ -0.76
CTDSPL-205ENST00000436654 hCG_1642624A0A1W2PR95 340 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 EPOPA6NHQ4 379 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 CCDC69A6NI79 296 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 NBNO60934 754 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 DDAH1O94760 285 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 BAIAP3O94812 1187 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 TGFB3P10600 412 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 KIF5BP33176 963 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 MCM5P33992 734 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 DEFB103AP81534 67 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SP4Q02446 784 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 RBL2Q08999 1139 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 TRIM71Q2Q1W2 868 aaKnown RBP10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 GNPTABQ3T906 1256 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 ZNF618Q5T7W0 954 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 CYFIP1Q7L576 1253 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SPRED2Q7Z698 418 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SRBD1Q8N5C6 995 aaKnown RBP10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SMARCC2Q8TAQ2 1214 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 CUL5Q93034 780 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 MAP3K14Q99558 947 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 C16orf70Q9BSU1 422 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SPZ1Q9BXG8 430 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 LRRC2Q9BYS8 371 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SEC63Q9UGP8 760 aaKnown RBP10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 TELO2Q9Y4R8 837 aa10.27□□□□□ -0.77
CTDSPL-205ENST00000436654 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 KIF28PB7ZC32 967 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 NOP56O00567 594 aaKnown RBP10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 TLL1O43897 1013 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 CXCL10P02778 98 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 LGALS2P05162 132 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 THPOP40225 353 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 TAP1Q03518 808 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 SEMA3FQ13275 785 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 MBTPS1Q14703 1052 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 SKIV2LQ15477 1246 aaKnown RBP10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 UTP14CQ5TAP6 766 aaKnown RBP10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 CREB3L3Q68CJ9 461 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 KRT40Q6A162 431 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 CNKSR3Q6P9H4 555 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 TRAF7Q6Q0C0 670 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 CCDC82Q8N4S0 544 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 TMEM87BQ96K49 555 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 INPP4AQ96PE3 977 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 LZTS2Q9BRK4 669 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 THEGQ9P2T0 379 aa10.26□□□□□ -0.77
CTDSPL-205ENST00000436654 FRMPD4Q14CM0 1322 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms