RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 PCDHGA8Q9Y5G5 932 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 PCDHGA7Q9Y5G6 932 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 PCDHGA6Q9Y5G7 932 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 PCDHGA3Q9Y5H0 932 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 PCDHGA2Q9Y5H1 932 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 CORINQ9Y5Q5 1042 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 CDC42BPAQ5VT25 1732 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 TTC21BQ7Z4L5 1316 aa6.9□□□□□ -1.31
VRK2-206ENST00000435505 MSH6P52701 1360 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 MADDQ8WXG6 1647 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 PHF20L1A8MW92 1017 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 TPP1O14773 563 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 POTEJP0CG39 1038 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 RHCEP18577 417 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 BMP6P22004 513 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 EIF5P55010 431 aaKnown RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 RHDQ02161 417 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ZNF252P-AS1Q0IIN9 211 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 SCRN1Q12765 414 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 KRT72Q14CN4 511 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 SV2CQ496J9 727 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ZC3H12BQ5HYM0 836 aaKnown RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 LMBRD2Q68DH5 695 aaPredicted RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 ERC1Q8IUD2 1116 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 SP7Q8TDD2 431 aaPredicted RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 SGCZQ96LD1 299 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 BICC1Q9H694 974 aaKnown RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 ARFGAP3Q9NP61 516 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 WBP1LQ9NX94 342 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
VRK2-206ENST00000435505 SPEF1Q9Y4P9 236 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 EFCAB8A8MWE9 144 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 INMTO95050 263 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 GPTP24298 496 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 GRIK1P39086 918 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ADCYAP1R1P41586 468 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 GNAI1P63096 354 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 MAP7Q14244 749 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 AGAP9Q5VTM2 703 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 IQSEC1Q6DN90 963 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ISM2Q6H9L7 571 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ANKRD23Q86SG2 305 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 AHI1Q8N157 1196 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 CCT6BQ92526 530 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 TTC17Q96AE7 1141 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 TM9SF2Q99805 663 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 STRN4Q9NRL3 753 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 VPS45Q9NRW7 570 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ETAA1Q9NY74 926 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 PTPN22Q9Y2R2 807 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 ZNF518AQ6AHZ1 1483 aa6.89□□□□□ -1.31
VRK2-206ENST00000435505 TUBGCP6Q96RT7 1819 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 EME2A4GXA9 379 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 MEN1O00255 615 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 STX6O43752 255 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 DTNBO60941 627 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 GNAI3P08754 354 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 EDN3P14138 238 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 ZKSCAN1P17029 563 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 CAPN3P20807 821 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 STT3AP46977 705 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CCNHP51946 323 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 GTF2H3Q13889 308 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 COL13A1Q5TAT6 717 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 SLC6A19Q695T7 634 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CNNM3Q8NE01 707 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CLIC6Q96NY7 704 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 TAAR9Q96RI9 348 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 SLC9A7Q96T83 725 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 RETREG1Q9H6L5 497 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 YTHDC2Q9H6S0 1430 aaKnown RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 BLOC1S4Q9NUP1 217 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CDC23Q9UJX2 597 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 PLA2R1Q13018 1463 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 PHLPP2Q6ZVD8 1323 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 DNMBPQ6XZF7 1577 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CD109Q6YHK3 1445 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 TRAV20A0A0B4J274 112 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 IQCA1LA6NCM1 817 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 M0R3H8 397 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 MAP2K7O14733 419 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 SRGAP3O43295 1099 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 MBD4O95243 580 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 ATE1O95260 518 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 RPN1P04843 607 aaKnown RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 SELPP16109 830 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 GCFC2P16383 781 aaKnown RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 LMNB1P20700 586 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 SYT1P21579 422 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 IL6STP40189 918 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 USP8P40818 1118 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 FXR1P51114 621 aaKnown RBP eCLIP6.88□□□□□ -1.31
VRK2-206ENST00000435505 NEDD9Q14511 834 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 NCAPHQ15003 741 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CFAP100Q494V2 611 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 SARM1Q6SZW1 724 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms