RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 VTA1Q9NP79 307 aa26.28■■□□□ 1.8
SMARCAL1-208ENST00000434435 RCOR1Q9UKL0 485 aa26.28■■□□□ 1.8
SMARCAL1-208ENST00000434435 MARCH6O60337 910 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 CCL14Q16627 93 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 EEPD1Q7L9B9 569 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 FBXO16Q8IX29 292 aaPredicted RBP26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 C4orf32Q8N8J7 132 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 GDPD2Q9HCC8 539 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 KCNMB3Q9NPA1 279 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 FLRT1Q9NZU1 646 aa26.27■■□□□ 1.8
SMARCAL1-208ENST00000434435 WDR81Q562E7 1941 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 MSH4O15457 936 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 MAFGO15525 162 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 PPP6R2O75170 966 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 RGS20O76081 388 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 HSPA1AP0DMV8 641 aaKnown RBP26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 HSPA1BP0DMV9 641 aaKnown RBP26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 ARP10275 920 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 PRPHP41219 470 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 ARL6IP4Q66PJ3 421 aaKnown RBP26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 SEPT14Q6ZU15 432 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 SLFN12Q8IYM2 578 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 ETNPPLQ8TBG4 499 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 KCNH7Q9NS40 1196 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 MRVI1Q9Y6F6 885 aa26.26■■□□□ 1.79
SMARCAL1-208ENST00000434435 FOXN1O15353 648 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 SNAI1O95863 264 aaPredicted RBP26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 HSPA8P11142 646 aaKnown RBP26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 MARCKSP29966 332 aaPredicted RBP26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 ICAM3P32942 547 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 OTOP1Q7RTM1 612 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 RAET1EQ8TD07 263 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 FAM20AQ96MK3 541 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 MTMR9Q96QG7 549 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 ZNF577Q9BSK1 485 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 ABHD16BQ9H3Z7 469 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 TRIM17Q9Y577 477 aa26.25■■□□□ 1.79
SMARCAL1-208ENST00000434435 ELP1O95163 1332 aa26.24■■□□□ 1.79
SMARCAL1-208ENST00000434435 SEMA3FQ13275 785 aa26.24■■□□□ 1.79
SMARCAL1-208ENST00000434435 KCNV1Q6PIU1 500 aa26.24■■□□□ 1.79
SMARCAL1-208ENST00000434435 TRIB2Q92519 343 aa26.24■■□□□ 1.79
SMARCAL1-208ENST00000434435 FERMT2Q96AC1 680 aa26.24■■□□□ 1.79
SMARCAL1-208ENST00000434435 AGO4Q9HCK5 861 aaKnown RBP26.24■■□□□ 1.79
SMARCAL1-208ENST00000434435 SPATA31C2B4DYI2 1134 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 IGHA2P01877 340 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 CTCFP49711 727 aaPredicted RBP26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 TMEM266Q2M3C6 531 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 MFSD14CQ5VZR4 134 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 DTHD1Q6ZMT9 781 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 HAS1Q92839 578 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 SLC5A5Q92911 643 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 KATNBL1Q9H079 304 aa26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 ZHX1Q9UKY1 873 aaPredicted RBP26.23■■□□□ 1.79
SMARCAL1-208ENST00000434435 GOLGA6L22H0YM25 854 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 IPO5O00410 1097 aaKnown RBP26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 ADCY3O60266 1144 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 CYP2C19P33261 490 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 TXKP42681 527 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 ME1P48163 572 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 ACVR2BQ13705 512 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 KRI1Q8N9T8 703 aaKnown RBP26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 TMEM87AQ8NBN3 555 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 SCFD2Q8WU76 684 aa26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 FBXO2Q9UK22 296 aaPredicted RBP26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 SRPRBQ9Y5M8 271 aaKnown RBP26.22■■□□□ 1.79
SMARCAL1-208ENST00000434435 GAS7O60861 476 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 TGFB3P10600 412 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 TTLL4Q14679 1199 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 LRCH2Q5VUJ6 765 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 UIMC1Q96RL1 719 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 TTC12Q9H892 705 aaPredicted RBP26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 PKD2L1Q9P0L9 805 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 NRBP1Q9UHY1 535 aa26.21■■□□□ 1.79
SMARCAL1-208ENST00000434435 RBM47A0AV96 593 aaKnown RBP26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 VWA3AA6NCI4 1184 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 TAPT1Q6NXT6 567 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 PXYLP1Q8TE99 480 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 GJA10Q969M2 543 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 RIT2Q99578 217 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 TEKT3Q9BXF9 490 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 RAB34Q9BZG1 259 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 TBC1D22BQ9NU19 505 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 TCEAL9Q9UHQ7 104 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 PCDHA12Q9UN75 941 aa26.2■■□□□ 1.78
SMARCAL1-208ENST00000434435 NFASCO94856 1347 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 CUTAO60888 179 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 HMGCRP04035 888 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 ELNP15502 786 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 KCNA2P16389 499 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 FXR2P51116 673 aaKnown RBP eCLIP26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 SLAIN1Q8ND83 568 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 SENP7Q9BQF6 1050 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 SDF4Q9BRK5 362 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 PDGFCQ9NRA1 345 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 PCDHA7Q9UN72 937 aa26.19■■□□□ 1.78
SMARCAL1-208ENST00000434435 MYH9P35579 1960 aaKnown RBP26.18■■□□□ 1.78
SMARCAL1-208ENST00000434435 ATP9AO75110 1047 aa26.18■■□□□ 1.78
SMARCAL1-208ENST00000434435 PSMD10O75832 226 aa26.18■■□□□ 1.78
SMARCAL1-208ENST00000434435 UBA1P22314 1058 aaKnown RBP26.18■■□□□ 1.78
SMARCAL1-208ENST00000434435 TECP42680 631 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms