RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 DDAH1O94760 285 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 HSDL1Q3SXM5 330 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 CASC1Q6TDU7 716 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 SKAP1Q86WV1 359 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 CTCFLQ8NI51 663 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 AFAP1L1Q8TED9 768 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 CHD9Q3L8U1 2897 aa25.23■■□□□ 1.63
RPUSD3-206ENST00000433535 PTPRSQ13332 1948 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 HAS3O00219 553 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 HOXD8P13378 290 aaPredicted RBP25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 IGFBP4P22692 258 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 KCNV1Q6PIU1 500 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 LRRC8DQ7L1W4 858 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 ESYT1Q9BSJ8 1104 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 SPZ1Q9BXG8 430 aa25.22■■□□□ 1.63
RPUSD3-206ENST00000433535 DOCK5Q9H7D0 1870 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 FRMPD4Q14CM0 1322 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 SLC27A2O14975 620 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 PLEKHA8P1O95397 391 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 CA3P07451 260 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 SELPP16109 830 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 RXRAP19793 462 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 SLC9A7Q96T83 725 aa25.21■■□□□ 1.63
RPUSD3-206ENST00000433535 SH2B2O14492 632 aaPredicted RBP25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 KIF5BP33176 963 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 MCM5P33992 734 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 MRPS9P82933 396 aaKnown RBP25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 ZNF200P98182 395 aaPredicted RBP25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 GPNMBQ14956 572 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 NFXL1Q6ZNB6 911 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 RAB11FIP4Q86YS3 637 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 WNT8BQ93098 351 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 RRP36Q96EU6 259 aaKnown RBP25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 MAP3K14Q99558 947 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 BCAS3Q9H6U6 928 aa25.2■■□□□ 1.62
RPUSD3-206ENST00000433535 CKBP12277 381 aa25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 RBL2Q08999 1139 aa25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 HIC1Q14526 733 aa25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 CCDC85BQ15834 202 aaPredicted RBP25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 USP17L6PQ6QN14 398 aa25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 CMTR1Q8N1G2 835 aaKnown RBP25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 MLXIPQ9HAP2 919 aa25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 ANO2Q9NQ90 1003 aa25.19■■□□□ 1.62
RPUSD3-206ENST00000433535 CCDC69A6NI79 296 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 PPFIA4O75335 1185 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 TGFB3P10600 412 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 CREB3L3Q68CJ9 461 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 HERC6Q8IVU3 1022 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 TMEM87BQ96K49 555 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 C16orf70Q9BSU1 422 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 MTA3Q9BTC8 594 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 RTEL1Q9NZ71 1219 aa25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 SEC63Q9UGP8 760 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-206ENST00000433535 NBNO60934 754 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 BAIAP3O94812 1187 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 ARHGEF15O94989 841 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 PTK7Q13308 1070 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 GNPTABQ3T906 1256 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 SRBD1Q8N5C6 995 aaKnown RBP25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 SMARCC2Q8TAQ2 1214 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 PHOSPHO2Q8TCD6 241 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 INPP4AQ96PE3 977 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 LRRC2Q9BYS8 371 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 CERS4Q9HA82 394 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 VCANP13611 3396 aa25.17■■□□□ 1.62
RPUSD3-206ENST00000433535 WDR5P61964 334 aaKnown RBP25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 SEMA3FQ13275 785 aa25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 NECTIN1Q15223 517 aa25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 TCTN1Q2MV58 587 aa25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 TRIM71Q2Q1W2 868 aaKnown RBP25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 TMCO2Q7Z6W1 182 aaPredicted RBP25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 CUL5Q93034 780 aa25.16■■□□□ 1.62
RPUSD3-206ENST00000433535 RFXAPO00287 272 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 MEIS2O14770 477 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 LGALS2P05162 132 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 KCNJ6P48051 423 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 ZNF618Q5T7W0 954 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 TRAF7Q6Q0C0 670 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 MICALL1Q8N3F8 863 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 LZTS2Q9BRK4 669 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 CHD7Q9P2D1 2997 aa25.15■■□□□ 1.62
RPUSD3-206ENST00000433535 hCG_1642624A0A1W2PR95 340 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 EPOPA6NHQ4 379 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 SPATA31C2B4DYI2 1134 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 NOP56O00567 594 aaKnown RBP25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 STAM2O75886 525 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 CXCL10P02778 98 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 SMARCA1P28370 1054 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 ICAM3P32942 547 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 GNAQP50148 359 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 DEFB103AP81534 67 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 MBTPS1Q14703 1052 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 CNKSR3Q6P9H4 555 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 CYFIP1Q7L576 1253 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 TMTC2Q8N394 836 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 TELO2Q9Y4R8 837 aa25.14■■□□□ 1.62
RPUSD3-206ENST00000433535 H3BRB1 525 aa25.13■■□□□ 1.61
RPUSD3-206ENST00000433535 FIBPO43427 364 aa25.13■■□□□ 1.61
RPUSD3-206ENST00000433535 LIFRP42702 1097 aa25.13■■□□□ 1.61
RPUSD3-206ENST00000433535 TAP1Q03518 808 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms