RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 SLC37A4O43826 429 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 TXNP10599 105 aaKnown RBP17.41■□□□□ 0.38
CNOT9-205ENST00000433439 PTGS1P23219 599 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 CIITAP33076 1130 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 DDIT3P35638 169 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
CNOT9-205ENST00000433439 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 TMEM63BQ5T3F8 832 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 PRPF38BQ5VTL8 546 aaKnown RBP17.41■□□□□ 0.38
CNOT9-205ENST00000433439 LENG1Q96BZ8 264 aaPredicted RBP17.41■□□□□ 0.38
CNOT9-205ENST00000433439 GPRASP2Q96D09 838 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 NAP1L4Q99733 375 aaKnown RBP17.41■□□□□ 0.38
CNOT9-205ENST00000433439 HMX1Q9NP08 348 aaPredicted RBP17.41■□□□□ 0.38
CNOT9-205ENST00000433439 FAM184BQ9ULE4 1060 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 PCDHB6Q9Y5E3 794 aa17.41■□□□□ 0.38
CNOT9-205ENST00000433439 IGLV3-22A0A075B6J6 115 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 MEIS1O00470 390 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 ARIH2O95376 493 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
CNOT9-205ENST00000433439 TRAPPC10P48553 1259 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 SETQ01105 290 aaPredicted RBP17.4■□□□□ 0.38
CNOT9-205ENST00000433439 TNFAIP2Q03169 654 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 MTFR1Q15390 333 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 LY6KQ17RY6 165 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 GJC2Q5T442 439 aaPredicted RBP17.4■□□□□ 0.38
CNOT9-205ENST00000433439 IQSEC1Q6DN90 963 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 MOXD1Q6UVY6 613 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 COPS5Q92905 334 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 GJA10Q969M2 543 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 KCNH7Q9NS40 1196 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 NRBP1Q9UHY1 535 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 KIAA1217Q5T5P2 1943 aa17.4■□□□□ 0.38
CNOT9-205ENST00000433439 CYP3A7-CYP3A51PA0A087WV96 503 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 SPATA31C2B4DYI2 1134 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 DDX39AO00148 427 aaKnown RBP17.39■□□□□ 0.37
CNOT9-205ENST00000433439 NEMFO60524 1076 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
CNOT9-205ENST00000433439 AKR1A1P14550 325 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 SMPD1P17405 629 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 CYP3A7P24462 503 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 SP4Q02446 784 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 SEMA3FQ13275 785 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 MAP3K21Q5TCX8 1036 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 NIPA1Q7RTP0 329 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 CDHR1Q96JP9 859 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 ZNF577Q9BSK1 485 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
CNOT9-205ENST00000433439 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
CNOT9-205ENST00000433439 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
CNOT9-205ENST00000433439 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
CNOT9-205ENST00000433439 TNRC18O15417 2968 aaPredicted RBP17.38■□□□□ 0.37
CNOT9-205ENST00000433439 SEPT4O43236 478 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 ADCY6O43306 1168 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 ATP9AO75110 1047 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 CCL5P13501 91 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 NCLP19338 710 aaKnown RBP17.38■□□□□ 0.37
CNOT9-205ENST00000433439 ICAM3P32942 547 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 SP2Q02086 613 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 CALCRLQ16602 461 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 Q4G0T1 1027 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 LENG9Q96B70 501 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 CHAMP1Q96JM3 812 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 MBOAT7Q96N66 472 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 ZNF396Q96N95 335 aaPredicted RBP17.38■□□□□ 0.37
CNOT9-205ENST00000433439 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.38■□□□□ 0.37
CNOT9-205ENST00000433439 RNF208Q9H0X6 261 aa17.38■□□□□ 0.37
CNOT9-205ENST00000433439 AGO4Q9HCK5 861 aaKnown RBP17.38■□□□□ 0.37
CNOT9-205ENST00000433439 DDX41Q9UJV9 622 aaKnown RBP17.38■□□□□ 0.37
CNOT9-205ENST00000433439 RBM47A0AV96 593 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 IPO5O00410 1097 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 MSH4O15457 936 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 DYNC1LI2O43237 492 aaPredicted RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 BAG4O95429 457 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 GGPS1O95749 300 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 UBA1P22314 1058 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 SF3A1Q15459 793 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 OR6J1Q8NGC5 347 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 SDF4Q9BRK5 362 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 TMEM60Q9H2L4 133 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 MLXIPQ9HAP2 919 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 DDX20Q9UHI6 824 aaKnown RBP17.37■□□□□ 0.37
CNOT9-205ENST00000433439 CLIC4Q9Y696 253 aa17.37■□□□□ 0.37
CNOT9-205ENST00000433439 MAFGO15525 162 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 GH1P01241 217 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 TGFB3P10600 412 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 RARBP10826 455 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 TXKP42681 527 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 DNM1Q05193 864 aaKnown RBP17.36■□□□□ 0.37
CNOT9-205ENST00000433439 PTGDRQ13258 359 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 DUSP28Q4G0W2 176 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms