RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 TAP1Q03518 808 aa16.13■□□□□ 0.17
SEC13-211ENST00000431352 SPRED2Q7Z698 418 aa16.13■□□□□ 0.17
SEC13-211ENST00000431352 PHOSPHO2Q8TCD6 241 aa16.13■□□□□ 0.17
SEC13-211ENST00000431352 RUFY2Q8WXA3 655 aa16.13■□□□□ 0.17
SEC13-211ENST00000431352 GPKOWQ92917 476 aaPredicted RBP eCLIP16.13■□□□□ 0.174e-7■□□□□ 8.6
SEC13-211ENST00000431352 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
SEC13-211ENST00000431352 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
SEC13-211ENST00000431352 LCHNA4D1U4 455 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
SEC13-211ENST00000431352 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 CKBP12277 381 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 CHMLP26374 656 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 CCND2P30279 289 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 DEFB103AP81534 67 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 GPNMBQ14956 572 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 WTAPQ15007 396 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
SEC13-211ENST00000431352 STOX1Q6ZVD7 989 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 WNT8BQ93098 351 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 UHRF1Q96T88 793 aaPredicted RBP16.12■□□□□ 0.17
SEC13-211ENST00000431352 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
SEC13-211ENST00000431352 E7EWF7 191 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 CYTH3O43739 400 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 NBNO60934 754 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 SP2Q02086 613 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 GHRHRQ02643 423 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 SART3Q15020 963 aaKnown RBP16.11■□□□□ 0.17
SEC13-211ENST00000431352 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 HSDL1Q3SXM5 330 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 MYSM1Q5VVJ2 828 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 FAM117BQ6P1L5 589 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 CNKSR3Q6P9H4 555 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 VSIG10LQ86VR7 867 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 NCOA7Q8NI08 942 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 NECAB3Q96P71 396 aaPredicted RBP16.11■□□□□ 0.17
SEC13-211ENST00000431352 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 MTUS1Q9ULD2 1270 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 MTCH2Q9Y6C9 303 aa16.11■□□□□ 0.17
SEC13-211ENST00000431352 PRRC2BQ5JSZ5 2229 aaKnown RBP16.1■□□□□ 0.17
SEC13-211ENST00000431352 PTPRSQ13332 1948 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 HAS3O00219 553 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 RBL2Q08999 1139 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 PTK7Q13308 1070 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 HIC1Q14526 733 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 ZNF618Q5T7W0 954 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 KCNV1Q6PIU1 500 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 CATIPQ7Z7H3 387 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 RIOX1Q9H6W3 641 aa16.1■□□□□ 0.17
SEC13-211ENST00000431352 MAP3K20Q9NYL2 800 aaKnown RBP16.1■□□□□ 0.17
SEC13-211ENST00000431352 COL4A4P53420 1690 aaPredicted RBP16.1■□□□□ 0.17
SEC13-211ENST00000431352 BAZ2BQ9UIF8 2168 aaKnown RBP16.1■□□□□ 0.17
SEC13-211ENST00000431352 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 PNMA6FA0A0J9YX94 578 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 HOXD8P13378 290 aaPredicted RBP16.09■□□□□ 0.17
SEC13-211ENST00000431352 THPOP40225 353 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 KCNQ1P51787 676 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 ANTXR2P58335 489 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 TROAPQ12815 778 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 TRAF1Q13077 416 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 GRB10Q13322 594 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
SEC13-211ENST00000431352 GDPD5Q8WTR4 605 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 BCAS3Q9H6U6 928 aa16.09■□□□□ 0.17
SEC13-211ENST00000431352 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
SEC13-211ENST00000431352 SGSM2O43147 1006 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 PPFIA4O75335 1185 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 PARNO95453 639 aaKnown RBP16.08■□□□□ 0.16
SEC13-211ENST00000431352 CXCL10P02778 98 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 SP4Q02446 784 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 TRAF7Q6Q0C0 670 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 C16orf70Q9BSU1 422 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
SEC13-211ENST00000431352 RBM8AQ9Y5S9 174 aaKnown RBP16.08■□□□□ 0.16
SEC13-211ENST00000431352 TRANK1O15050 2925 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 ABHD14A-ACY1A0A1B0GW23 586 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 C17orf102A2RUQ5 167 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 LGALS2P05162 132 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 CTSHP09668 335 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 IKBKEQ14164 716 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 MB21D2Q8IYB1 491 aaPredicted RBP16.07■□□□□ 0.16
SEC13-211ENST00000431352 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 ATP6V0A1Q93050 837 aa16.07■□□□□ 0.16
SEC13-211ENST00000431352 H3BRB1 525 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 LGR5O75473 907 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 GJB5O95377 273 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 TGFB3P10600 412 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 MRPS9P82933 396 aaKnown RBP16.06■□□□□ 0.16
SEC13-211ENST00000431352 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 CYFIP1Q7L576 1253 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 SERINC5Q86VE9 423 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 TRIM50Q86XT4 487 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
SEC13-211ENST00000431352 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
SEC13-211ENST00000431352 RRP36Q96EU6 259 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms