RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 RXRAP19793 462 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 CASTP20810 708 aaKnown RBP18.84■□□□□ 0.61
PTPRA-206ENST00000430705 RFC2P35250 354 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 RBL2Q08999 1139 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 LAMC2Q13753 1193 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 MFSD10Q14728 455 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 NECTIN1Q15223 517 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 TRIM71Q2Q1W2 868 aaKnown RBP18.84■□□□□ 0.61
PTPRA-206ENST00000430705 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
PTPRA-206ENST00000430705 TRAF7Q6Q0C0 670 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
PTPRA-206ENST00000430705 MAP3K14Q99558 947 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 PRDM6Q9NQX0 595 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 MSRAQ9UJ68 235 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 TELO2Q9Y4R8 837 aa18.84■□□□□ 0.61
PTPRA-206ENST00000430705 COL4A4P53420 1690 aaPredicted RBP18.83■□□□□ 0.61
PTPRA-206ENST00000430705 ATP2A2P16615 1042 aaKnown RBP18.83■□□□□ 0.6
PTPRA-206ENST00000430705 CCND2P30279 289 aa18.83■□□□□ 0.6
PTPRA-206ENST00000430705 KIAA0753Q2KHM9 967 aa18.83■□□□□ 0.6
PTPRA-206ENST00000430705 CREB3L3Q68CJ9 461 aa18.83■□□□□ 0.6
PTPRA-206ENST00000430705 CMTR1Q8N1G2 835 aaKnown RBP18.83■□□□□ 0.6
PTPRA-206ENST00000430705 SRBD1Q8N5C6 995 aaKnown RBP18.83■□□□□ 0.6
PTPRA-206ENST00000430705 ALG1Q9BT22 464 aa18.83■□□□□ 0.6
PTPRA-206ENST00000430705 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
PTPRA-206ENST00000430705 BFSP2Q13515 415 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 RAB11FIP4Q86YS3 637 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 CAGE1Q8TC20 777 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 AFAP1L1Q8TED9 768 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 SPATA33Q96N06 139 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 INPP4AQ96PE3 977 aaPredicted RBP18.82■□□□□ 0.6
PTPRA-206ENST00000430705 C16orf70Q9BSU1 422 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 MTA3Q9BTC8 594 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 NOD1Q9Y239 953 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 PCDHA11Q9Y5I1 949 aa18.82■□□□□ 0.6
PTPRA-206ENST00000430705 MEIS2O14770 477 aa18.81■□□□□ 0.6
PTPRA-206ENST00000430705 MBTPS1Q14703 1052 aa18.81■□□□□ 0.6
PTPRA-206ENST00000430705 USP17L6PQ6QN14 398 aa18.81■□□□□ 0.6
PTPRA-206ENST00000430705 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
PTPRA-206ENST00000430705 NBNO60934 754 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 CA3P07451 260 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 CKBP12277 381 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 SELPP16109 830 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 HOXC8P31273 242 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 ICAM3P32942 547 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 MCM5P33992 734 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 TRAF1Q13077 416 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 BMP2KLQ5H9B9 411 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 KCNV1Q6PIU1 500 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 C7orf31Q8N865 590 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 CTCFLQ8NI51 663 aaPredicted RBP18.8■□□□□ 0.6
PTPRA-206ENST00000430705 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 KATNAL1Q9BW62 490 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 SLC28A3Q9HAS3 691 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 ANO2Q9NQ90 1003 aa18.8■□□□□ 0.6
PTPRA-206ENST00000430705 hCG_1642624A0A1W2PR95 340 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 EPOPA6NHQ4 379 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 PIK3CDO00329 1044 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 PPFIA4O75335 1185 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 CXCL10P02778 98 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 TGFB3P10600 412 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 SMARCA1P28370 1054 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 LIFRP42702 1097 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 SPRED2Q7Z698 418 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 RRP36Q96EU6 259 aaKnown RBP18.79■□□□□ 0.6
PTPRA-206ENST00000430705 SLC9A7Q96T83 725 aa18.79■□□□□ 0.6
PTPRA-206ENST00000430705 GAS2L1Q99501 681 aaPredicted RBP18.79■□□□□ 0.6
PTPRA-206ENST00000430705 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTPRA-206ENST00000430705 SPATA31C2B4DYI2 1134 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 LGALS2P05162 132 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 ACTN1P12814 892 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 KIF5BP33176 963 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 PTK7Q13308 1070 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 TMTC3Q6ZXV5 915 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 TMCO2Q7Z6W1 182 aaPredicted RBP18.78■□□□□ 0.6
PTPRA-206ENST00000430705 HERC6Q8IVU3 1022 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 CCDC155Q8N6L0 562 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 RTEL1Q9NZ71 1219 aa18.78■□□□□ 0.6
PTPRA-206ENST00000430705 SIP14410 1827 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 CCDC69A6NI79 296 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 BAIAP3O94812 1187 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 WDR5P61964 334 aaKnown RBP18.77■□□□□ 0.6
PTPRA-206ENST00000430705 DEFB103AP81534 67 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 ZNF618Q5T7W0 954 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 SGMS1Q86VZ5 419 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 TRIM50Q86XT4 487 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 LZTS2Q9BRK4 669 aa18.77■□□□□ 0.6
PTPRA-206ENST00000430705 CNTNAP5Q8WYK1 1306 aa18.76■□□□□ 0.59
PTPRA-206ENST00000430705 TTC28Q96AY4 2481 aa18.76■□□□□ 0.59
PTPRA-206ENST00000430705 RFXAPO00287 272 aa18.76■□□□□ 0.59
PTPRA-206ENST00000430705 STAM2O75886 525 aa18.76■□□□□ 0.59
PTPRA-206ENST00000430705 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
PTPRA-206ENST00000430705 UBE2SQ16763 222 aa18.76■□□□□ 0.59
PTPRA-206ENST00000430705 METTL7BQ6UX53 244 aa18.76■□□□□ 0.59
PTPRA-206ENST00000430705 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms