RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OTUD6BQ8N6M0 293 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 MSANTD4Q8NCY6 345 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 LRFN2Q9ULH4 789 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 SHMT1P34896 483 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 GIMAP7Q8NHV1 300 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 GAP43P17677 238 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 SMARCA1P28370 1054 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
PTCH1-207ENST00000429896 FAM20AQ96MK3 541 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-207ENST00000429896 SFNP31947 248 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ARID5AQ03989 594 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-207ENST00000429896 GRIK5Q16478 980 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 KRBA2Q6ZNG9 492 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ZNF830Q96NB3 372 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-207ENST00000429896 JMJD4Q9H9V9 463 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ZNF302Q9NR11 478 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 FAM198AQ9UFP1 575 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 SHTN1A0MZ66 631 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 FMNL3Q8IVF7 1028 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 JADE2Q9NQC1 790 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 STK17AQ9UEE5 414 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 PDHXO00330 501 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 PRPF6O94906 941 aaKnown RBP14.25□□□□□ -0.13
PTCH1-207ENST00000429896 CEP83Q9Y592 693 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 STAMBPO95630 424 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 RGS2P41220 211 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 USP11P51784 963 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 OXER1Q8TDS5 423 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 AKR1B10O60218 316 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 TXNP10599 105 aaKnown RBP14.25□□□□□ -0.13
PTCH1-207ENST00000429896 VCAM1P19320 739 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 PLEKHH3Q7Z736 793 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 AGBL1Q96MI9 1066 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 KMT5AQ9NQR1 393 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 SALL3Q9BXA9 1300 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 A0A1W2PQ27 194 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 A0A1W2PQ64 194 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 A0A1W2PQD8 194 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 FAM170AA1A519 330 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 KRT5P13647 590 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 ABCD1P33897 745 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 OR6J1Q8NGC5 347 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 RESTQ13127 1097 aa14.25□□□□□ -0.13
PTCH1-207ENST00000429896 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 TNNI1P19237 187 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 SLC8A3P57103 927 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 PKP1Q13835 747 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 RAPGEF1Q13905 1077 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 INO80BQ9C086 356 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 MAPK4P31152 587 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 CYP2J2P51589 502 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 ZFPM1Q8IX07 1006 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 KIAA1683Q9H0B3 1180 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 ICAM1P05362 532 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 BMS1Q14692 1282 aaKnown RBP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 ABI1Q8IZP0 508 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 ANKFY1Q9P2R3 1169 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 MAD2L2Q9UI95 211 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 RPN1P04843 607 aaKnown RBP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 PTGS1P23219 599 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 FKBP1BP68106 108 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 FAM26FQ5R3K3 315 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 SRPRBQ9Y5M8 271 aaKnown RBP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 RGPD2P0DJD1 1756 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 KBTBD13C9JR72 458 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 GNA14O95837 355 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 GMCL1Q96IK5 515 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 IL25Q9H293 177 aa14.24□□□□□ -0.13
PTCH1-207ENST00000429896 TAF1DQ9H5J8 278 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-207ENST00000429896 PPIL2Q13356 520 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 VGLL4Q14135 290 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 P4HA1P13674 534 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 LINC00301Q8NCQ3 95 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 CPA4Q9UI42 421 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 FAM49AQ9H0Q0 323 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-207ENST00000429896 MROH8Q9H579 483 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 FZD1Q9UP38 647 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 TNNC2P02585 160 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 HS1BP3Q53T59 392 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 ATF7P17544 494 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-207ENST00000429896 NDUFA8P51970 172 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 BANK1Q8NDB2 785 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 KIFAP3Q92845 792 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 RPS6KC1Q96S38 1066 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 PCDHAC2Q9Y5I4 1007 aa14.23□□□□□ -0.13
PTCH1-207ENST00000429896 RHBDL3P58872 404 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
PTCH1-207ENST00000429896 ALS2CR12Q96Q35 445 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms