RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GGPS1O95749 300 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 CA3P07451 260 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 POLR2MP0CAP2 368 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
SEC13-210ENST00000428626 MFSD10Q14728 455 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 KIAA0753Q2KHM9 967 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 TRIM71Q2Q1W2 868 aaKnown RBP17.99■□□□□ 0.47
SEC13-210ENST00000428626 CELF3Q5SZQ8 465 aaKnown RBP17.99■□□□□ 0.47
SEC13-210ENST00000428626 PPP2R2DQ66LE6 453 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 TRAF7Q6Q0C0 670 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 SPRED2Q7Z698 418 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 PRRC2BQ5JSZ5 2229 aaKnown RBP17.99■□□□□ 0.47
SEC13-210ENST00000428626 DOCK5Q9H7D0 1870 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 EPOPA6NHQ4 379 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 RFXAPO00287 272 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 NBNO60934 754 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 IGFBP4P22692 258 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 RBL2Q08999 1139 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 SEMA3FQ13275 785 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 CCDC85BQ15834 202 aaPredicted RBP17.98■□□□□ 0.47
SEC13-210ENST00000428626 TMCO2Q7Z6W1 182 aaPredicted RBP17.98■□□□□ 0.47
SEC13-210ENST00000428626 ZNF654Q8IZM8 581 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 CAGE1Q8TC20 777 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 AFAP1L1Q8TED9 768 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 FTOQ9C0B1 505 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEC13-210ENST00000428626 TELO2Q9Y4R8 837 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 FRMPD4Q14CM0 1322 aa17.98■□□□□ 0.47
SEC13-210ENST00000428626 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 CKBP12277 381 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 SELPP16109 830 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 MBTPS1Q14703 1052 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
SEC13-210ENST00000428626 LRRC8DQ7L1W4 858 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 CATIPQ7Z7H3 387 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 C7orf31Q8N865 590 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 SPATA33Q96N06 139 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 C16orf70Q9BSU1 422 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 CERS4Q9HA82 394 aa17.97■□□□□ 0.47
SEC13-210ENST00000428626 SH2B2O14492 632 aaPredicted RBP17.96■□□□□ 0.47
SEC13-210ENST00000428626 PRC1O43663 620 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 PPFIA4O75335 1185 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 ACTN1P12814 892 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 RXRAP19793 462 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 CCND2P30279 289 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 USP17L6PQ6QN14 398 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 HERC6Q8IVU3 1022 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 CMTR1Q8N1G2 835 aaKnown RBP17.96■□□□□ 0.47
SEC13-210ENST00000428626 SLC9A7Q96T83 725 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 ESYT1Q9BSJ8 1104 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
SEC13-210ENST00000428626 MEIS2O14770 477 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 SLC27A2O14975 620 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 CXCL10P02778 98 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 WDR5P61964 334 aaKnown RBP17.95■□□□□ 0.46
SEC13-210ENST00000428626 DEFB103AP81534 67 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 ZNF618Q5T7W0 954 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 KCNV1Q6PIU1 500 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 RAB11FIP4Q86YS3 637 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
SEC13-210ENST00000428626 PHOSPHO2Q8TCD6 241 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
SEC13-210ENST00000428626 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 KATNAL1Q9BW62 490 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 RTEL1Q9NZ71 1219 aa17.95■□□□□ 0.46
SEC13-210ENST00000428626 LCHNA4D1U4 455 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 DDAH1O94760 285 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 TGFB3P10600 412 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 ICAM3P32942 547 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 TAP1Q03518 808 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 PTK7Q13308 1070 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 NECTIN1Q15223 517 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 KRT40Q6A162 431 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 CCDC155Q8N6L0 562 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 LRRC2Q9BYS8 371 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 OSBPL7Q9BZF2 842 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 NCOR1O75376 2440 aa17.94■□□□□ 0.46
SEC13-210ENST00000428626 XIRP2A4UGR9 3374 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 SPATA31C2B4DYI2 1134 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 BAIAP3O94812 1187 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 LGALS2P05162 132 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 HOXC8P31273 242 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 TRAF1Q13077 416 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 TJAP1Q5JTD0 557 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 CREB3L3Q68CJ9 461 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 CTCFLQ8NI51 663 aaPredicted RBP17.93■□□□□ 0.46
SEC13-210ENST00000428626 MLXIPQ9HAP2 919 aa17.93■□□□□ 0.46
SEC13-210ENST00000428626 hCG_1642624A0A1W2PR95 340 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 MCM5P33992 734 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 CNKSR3Q6P9H4 555 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 CYFIP1Q7L576 1253 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 SERINC5Q86VE9 423 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 RRP36Q96EU6 259 aaKnown RBP17.92■□□□□ 0.46
SEC13-210ENST00000428626 MTA3Q9BTC8 594 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 THEGQ9P2T0 379 aa17.92■□□□□ 0.46
SEC13-210ENST00000428626 H3BRB1 525 aa17.91■□□□□ 0.46
SEC13-210ENST00000428626 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
SEC13-210ENST00000428626 TRIM50Q86XT4 487 aa17.91■□□□□ 0.46
SEC13-210ENST00000428626 MICALL1Q8N3F8 863 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms