RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
RDH11-202ENST00000428130 ZNF200P98182 395 aaPredicted RBP12.1□□□□□ -0.47
RDH11-202ENST00000428130 HIC1Q14526 733 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 MFSD10Q14728 455 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 SMAD2Q15796 467 aaKnown RBP12.1□□□□□ -0.47
RDH11-202ENST00000428130 KIAA0753Q2KHM9 967 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 RPAINQ86UA6 219 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 FBXO11Q86XK2 927 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 TMEM192Q8IY95 271 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 RGS22Q8NE09 1264 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
RDH11-202ENST00000428130 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
RDH11-202ENST00000428130 ANAPC4Q9UJX5 808 aa12.1□□□□□ -0.47
RDH11-202ENST00000428130 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 VPS13AQ96RL7 3174 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 PLXNA3P51805 1871 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 MBTPS2O43462 519 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 FGRP09769 529 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 USH1GQ495M9 461 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 TBC1D5Q92609 795 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 TOP1MTQ969P6 601 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 TAAR1Q96RJ0 339 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 YME1L1Q96TA2 773 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
RDH11-202ENST00000428130 COL20A1Q9P218 1284 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 KAT6AQ92794 2004 aa12.09□□□□□ -0.47
RDH11-202ENST00000428130 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 NCK2O43639 380 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 ST18O60284 1047 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 SNHG28P0DPA3 235 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
RDH11-202ENST00000428130 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
RDH11-202ENST00000428130 DLX2Q07687 328 aaPredicted RBP12.08□□□□□ -0.48
RDH11-202ENST00000428130 STXBP2Q15833 593 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 CLUL1Q15846 466 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 IER5LQ5T953 404 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 SYTL5Q8TDW5 730 aaPredicted RBP12.08□□□□□ -0.48
RDH11-202ENST00000428130 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
RDH11-202ENST00000428130 EDAQ92838 391 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 MAF1Q9H063 256 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.48
RDH11-202ENST00000428130 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
RDH11-202ENST00000428130 ZDBF2Q9HCK1 2354 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 DCHS1Q96JQ0 3298 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 LAMA4Q16363 1823 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 ZFHX2Q9C0A1 2572 aaPredicted RBP12.07□□□□□ -0.48
RDH11-202ENST00000428130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.07□□□□□ -0.48
RDH11-202ENST00000428130 UPP2O95045 317 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 THPOP40225 353 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 PTPN5P54829 565 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 HYAL1Q12794 435 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 LAMC2Q13753 1193 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 VPS53Q5VIR6 699 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 DHX37Q8IY37 1157 aaKnown RBP12.07□□□□□ -0.48
RDH11-202ENST00000428130 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 IWS1Q96ST2 819 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 OSBPL7Q9BZF2 842 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
RDH11-202ENST00000428130 PLXNA4Q9HCM2 1894 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 LOXHD1Q8IVV2 1947 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 C5orf67F2Z3F1 127 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 TBX10O75333 385 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 LINC00271P0C7V0 271 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 TCF15Q12870 199 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 SMAD4Q13485 552 aaKnown RBP12.06□□□□□ -0.48
RDH11-202ENST00000428130 RRP12Q5JTH9 1297 aaKnown RBP12.06□□□□□ -0.48
RDH11-202ENST00000428130 SEPT8Q92599 483 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 RMDN3Q96TC7 470 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 LMAN2LQ9H0V9 348 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 CPVLQ9H3G5 476 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 TTC3P53804 2025 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 ABCB11O95342 1321 aa12.06□□□□□ -0.48
RDH11-202ENST00000428130 TMEM221A6NGB7 291 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 M0R296 226 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 STXBP3O00186 592 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 GRM6O15303 877 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 EIF3JO75822 258 aaKnown RBP12.05□□□□□ -0.48
RDH11-202ENST00000428130 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
RDH11-202ENST00000428130 HOXC8P31273 242 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 CTNNB1P35222 781 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 GTF2F1P35269 517 aaKnown RBP eCLIP12.05□□□□□ -0.48
RDH11-202ENST00000428130 HSDL1Q3SXM5 330 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
RDH11-202ENST00000428130 TTC14Q96N46 770 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms