RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ASB2Q96Q27 587 aa15.06■□□□□ 0
VRK3-203ENST00000424804 PIGSQ96S52 555 aa15.06■□□□□ 0
VRK3-203ENST00000424804 MAP3K20Q9NYL2 800 aaKnown RBP15.06■□□□□ 0
VRK3-203ENST00000424804 PCDHA1Q9Y5I3 950 aa15.06■□□□□ 0
VRK3-203ENST00000424804 RBM8AQ9Y5S9 174 aaKnown RBP15.06■□□□□ 0
VRK3-203ENST00000424804 E7EWF7 191 aa15.05■□□□□ -0
VRK3-203ENST00000424804 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
VRK3-203ENST00000424804 CDC45O75419 566 aa15.05■□□□□ -0
VRK3-203ENST00000424804 CKBP12277 381 aa15.05■□□□□ -0
VRK3-203ENST00000424804 LAMC2Q13753 1193 aa15.05■□□□□ -0
VRK3-203ENST00000424804 DGKDQ16760 1214 aa15.05■□□□□ -0
VRK3-203ENST00000424804 HSDL1Q3SXM5 330 aa15.05■□□□□ -0
VRK3-203ENST00000424804 TMEM67Q5HYA8 995 aa15.05■□□□□ -0
VRK3-203ENST00000424804 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
VRK3-203ENST00000424804 HERC6Q8IVU3 1022 aa15.05■□□□□ -0
VRK3-203ENST00000424804 SAMD3Q8N6K7 520 aa15.05■□□□□ -0
VRK3-203ENST00000424804 CAGE1Q8TC20 777 aa15.05■□□□□ -0
VRK3-203ENST00000424804 SLC9A7Q96T83 725 aa15.05■□□□□ -0
VRK3-203ENST00000424804 C16orf70Q9BSU1 422 aa15.05■□□□□ -0
VRK3-203ENST00000424804 MTCH2Q9Y6C9 303 aa15.05■□□□□ -0
VRK3-203ENST00000424804 DOCK5Q9H7D0 1870 aa15.05■□□□□ -0
VRK3-203ENST00000424804 TCF20Q9UGU0 1960 aaKnown RBP15.05■□□□□ -0
VRK3-203ENST00000424804 FRMPD4Q14CM0 1322 aa15.04■□□□□ -0
VRK3-203ENST00000424804 LPXNO60711 386 aa15.04■□□□□ -0
VRK3-203ENST00000424804 ZNF286BP0CG31 522 aa15.04■□□□□ -0
VRK3-203ENST00000424804 SELPP16109 830 aa15.04■□□□□ -0
VRK3-203ENST00000424804 HOXC8P31273 242 aa15.04■□□□□ -0
VRK3-203ENST00000424804 CHMP4BP1P59074 171 aa15.04■□□□□ -0
VRK3-203ENST00000424804 MRPS9P82933 396 aaKnown RBP15.04■□□□□ -0
VRK3-203ENST00000424804 SEMA3FQ13275 785 aa15.04■□□□□ -0
VRK3-203ENST00000424804 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
VRK3-203ENST00000424804 MFSD10Q14728 455 aa15.04■□□□□ -0
VRK3-203ENST00000424804 KRT40Q6A162 431 aa15.04■□□□□ -0
VRK3-203ENST00000424804 TMCO2Q7Z6W1 182 aaPredicted RBP15.04■□□□□ -0
VRK3-203ENST00000424804 DHX37Q8IY37 1157 aaKnown RBP15.04■□□□□ -0
VRK3-203ENST00000424804 MB21D2Q8IYB1 491 aaPredicted RBP15.04■□□□□ -0
VRK3-203ENST00000424804 MAP4K1Q92918 833 aa15.04■□□□□ -0
VRK3-203ENST00000424804 ALG1Q9BT22 464 aa15.04■□□□□ -0
VRK3-203ENST00000424804 CERS4Q9HA82 394 aa15.04■□□□□ -0
VRK3-203ENST00000424804 THEGQ9P2T0 379 aa15.04■□□□□ -0
VRK3-203ENST00000424804 TELO2Q9Y4R8 837 aa15.04■□□□□ -0
VRK3-203ENST00000424804 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
VRK3-203ENST00000424804 BRWD1Q9NSI6 2320 aa15.03■□□□□ -0
VRK3-203ENST00000424804 LCHNA4D1U4 455 aa15.03■□□□□ -0
VRK3-203ENST00000424804 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
VRK3-203ENST00000424804 PPFIA4O75335 1185 aa15.03■□□□□ -0
VRK3-203ENST00000424804 BAIAP3O94812 1187 aa15.03■□□□□ -0
VRK3-203ENST00000424804 MYCLP12524 364 aaPredicted RBP15.03■□□□□ -0
VRK3-203ENST00000424804 ACTN1P12814 892 aa15.03■□□□□ -0
VRK3-203ENST00000424804 WDR5P61964 334 aaKnown RBP15.03■□□□□ -0
VRK3-203ENST00000424804 DEFB103AP81534 67 aa15.03■□□□□ -0
VRK3-203ENST00000424804 PTK7Q13308 1070 aa15.03■□□□□ -0
VRK3-203ENST00000424804 KIAA0753Q2KHM9 967 aa15.03■□□□□ -0
VRK3-203ENST00000424804 LRRC8DQ7L1W4 858 aa15.03■□□□□ -0
VRK3-203ENST00000424804 OSBPL7Q9BZF2 842 aa15.03■□□□□ -0
VRK3-203ENST00000424804 FTOQ9C0B1 505 aaKnown RBP eCLIP15.03■□□□□ -0
VRK3-203ENST00000424804 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
VRK3-203ENST00000424804 PNMA6FA0A0J9YX94 578 aa15.02■□□□□ -0
VRK3-203ENST00000424804 SORBS3O60504 671 aa15.02■□□□□ -0
VRK3-203ENST00000424804 GGPS1O95749 300 aa15.02■□□□□ -0
VRK3-203ENST00000424804 BMP1P13497 986 aa15.02■□□□□ -0
VRK3-203ENST00000424804 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
VRK3-203ENST00000424804 MRPS5P82675 430 aaKnown RBP15.02■□□□□ -0
VRK3-203ENST00000424804 ZNF618Q5T7W0 954 aa15.02■□□□□ -0
VRK3-203ENST00000424804 HOMER1Q86YM7 354 aa15.02■□□□□ -0
VRK3-203ENST00000424804 NCOA7Q8NI08 942 aa15.02■□□□□ -0
VRK3-203ENST00000424804 NOD1Q9Y239 953 aa15.02■□□□□ -0
VRK3-203ENST00000424804 ERICH2A1L162 156 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 GCOM1H8Y6P7 765 aaPredicted RBP15.01□□□□□ -0.01
VRK3-203ENST00000424804 TNFRSF10AO00220 468 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 POLR2MP0CAP2 368 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 TGFB3P10600 412 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 ICAM3P32942 547 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 WTAPQ15007 396 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 CNKSR3Q6P9H4 555 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 KCNV1Q6PIU1 500 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 C7orf31Q8N865 590 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 LY9Q9HBG7 655 aa15.01□□□□□ -0.01
VRK3-203ENST00000424804 SLC27A2O14975 620 aa15□□□□□ -0.01
VRK3-203ENST00000424804 TFF2Q03403 129 aa15□□□□□ -0.01
VRK3-203ENST00000424804 GRB10Q13322 594 aa15□□□□□ -0.01
VRK3-203ENST00000424804 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
VRK3-203ENST00000424804 SERINC5Q86VE9 423 aa15□□□□□ -0.01
VRK3-203ENST00000424804 FCHSD1Q86WN1 690 aa15□□□□□ -0.01
VRK3-203ENST00000424804 CCDC155Q8N6L0 562 aa15□□□□□ -0.01
VRK3-203ENST00000424804 SPATA33Q96N06 139 aa15□□□□□ -0.01
VRK3-203ENST00000424804 INPP4AQ96PE3 977 aaPredicted RBP15□□□□□ -0.01
VRK3-203ENST00000424804 KATNAL1Q9BW62 490 aa15□□□□□ -0.01
VRK3-203ENST00000424804 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
VRK3-203ENST00000424804 COL4A4P53420 1690 aaPredicted RBP15□□□□□ -0.01
VRK3-203ENST00000424804 SPATA31C2B4DYI2 1134 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 MEIS2O14770 477 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 PARNO95453 639 aaKnown RBP14.99□□□□□ -0.01
VRK3-203ENST00000424804 CCND2P30279 289 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 SART3Q15020 963 aaKnown RBP14.99□□□□□ -0.01
VRK3-203ENST00000424804 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 ADAMTS19Q8TE59 1207 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 ARNTL2Q8WYA1 636 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 MAP3K14Q99558 947 aa14.99□□□□□ -0.01
VRK3-203ENST00000424804 ABHD14A-ACY1A0A1B0GW23 586 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms