RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 HAS3O00219 553 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 HOXD8P13378 290 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-206ENST00000423161 SELPP16109 830 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 UBA1P22314 1058 aaKnown RBP21.38■■□□□ 1.01
SREBF1-206ENST00000423161 RBL2Q08999 1139 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 HSDL1Q3SXM5 330 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 LRRC8DQ7L1W4 858 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 ZNF654Q8IZM8 581 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 LY9Q9HBG7 655 aa21.38■■□□□ 1.01
SREBF1-206ENST00000423161 TTC28Q96AY4 2481 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 PPFIA4O75335 1185 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 DDAH1O94760 285 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 BAIAP3O94812 1187 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 CA3P07451 260 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 TGFB3P10600 412 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 SP2Q02086 613 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 CCDC85BQ15834 202 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-206ENST00000423161 CASC1Q6TDU7 716 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-206ENST00000423161 PHOSPHO2Q8TCD6 241 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 SYMPKQ92797 1274 aaKnown RBP21.37■■□□□ 1.01
SREBF1-206ENST00000423161 GPKOWQ92917 476 aaPredicted RBP eCLIP21.37■■□□□ 1.017e-6■□□□□ 8.1
SREBF1-206ENST00000423161 MYL10Q9BUA6 226 aa21.37■■□□□ 1.01
SREBF1-206ENST00000423161 FRMPD4Q14CM0 1322 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 PRC1O43663 620 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 CKBP12277 381 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 KIF5BP33176 963 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 TJAP1Q5JTD0 557 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 RRP36Q96EU6 259 aaKnown RBP21.36■■□□□ 1.01
SREBF1-206ENST00000423161 MAP3K14Q99558 947 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 SPZ1Q9BXG8 430 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 MLXIPQ9HAP2 919 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 KAT6AQ92794 2004 aa21.36■■□□□ 1.01
SREBF1-206ENST00000423161 PRRC2BQ5JSZ5 2229 aaKnown RBP21.35■■□□□ 1.01
SREBF1-206ENST00000423161 PARNO95453 639 aaKnown RBP21.35■■□□□ 1.01
SREBF1-206ENST00000423161 KCNJ6P48051 423 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 PTK7Q13308 1070 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 GPNMBQ14956 572 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 GNPTABQ3T906 1256 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 HERC6Q8IVU3 1022 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 MTA3Q9BTC8 594 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 LSG1Q9H089 658 aaKnown RBP21.35■■□□□ 1.01
SREBF1-206ENST00000423161 THEGQ9P2T0 379 aa21.35■■□□□ 1.01
SREBF1-206ENST00000423161 MICAL3Q7RTP6 2002 aa21.34■■□□□ 1.01
SREBF1-206ENST00000423161 MCM5P33992 734 aa21.34■■□□□ 1.01
SREBF1-206ENST00000423161 MRPS9P82933 396 aaKnown RBP21.34■■□□□ 1.01
SREBF1-206ENST00000423161 ZNF200P98182 395 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-206ENST00000423161 CNKSR3Q6P9H4 555 aa21.34■■□□□ 1.01
SREBF1-206ENST00000423161 NFXL1Q6ZNB6 911 aa21.34■■□□□ 1.01
SREBF1-206ENST00000423161 SEC63Q9UGP8 760 aaKnown RBP21.34■■□□□ 1.01
SREBF1-206ENST00000423161 REV3LO60673 3130 aa21.34■■□□□ 1.01
SREBF1-206ENST00000423161 COL4A4P53420 1690 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-206ENST00000423161 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 KIF28PB7ZC32 967 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 SH2B2O14492 632 aaPredicted RBP21.33■■□□□ 1.01
SREBF1-206ENST00000423161 NBNO60934 754 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 STAM2O75886 525 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 CXCL10P02778 98 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 WDR5P61964 334 aaKnown RBP21.33■■□□□ 1.01
SREBF1-206ENST00000423161 TRIM71Q2Q1W2 868 aaKnown RBP21.33■■□□□ 1.01
SREBF1-206ENST00000423161 MICALL1Q8N3F8 863 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 SMARCC2Q8TAQ2 1214 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 CUL5Q93034 780 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 WNT8BQ93098 351 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 TMEM87BQ96K49 555 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 INPP4AQ96PE3 977 aaPredicted RBP21.33■■□□□ 1.01
SREBF1-206ENST00000423161 ESYT1Q9BSJ8 1104 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 C16orf70Q9BSU1 422 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 CERS4Q9HA82 394 aa21.33■■□□□ 1.01
SREBF1-206ENST00000423161 SLC27A2O14975 620 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 PLEKHA8P1O95397 391 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 SMARCA1P28370 1054 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 ICAM3P32942 547 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 GNAQP50148 359 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 HIC1Q14526 733 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 ZNF618Q5T7W0 954 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 USP17L6PQ6QN14 398 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 TMTC2Q8N394 836 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 ATXN2LQ8WWM7 1075 aaKnown RBP21.32■■□□□ 1
SREBF1-206ENST00000423161 LZTS2Q9BRK4 669 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 BCAS3Q9H6U6 928 aa21.32■■□□□ 1
SREBF1-206ENST00000423161 NOP56O00567 594 aaKnown RBP21.31■■□□□ 1
SREBF1-206ENST00000423161 FIBPO43427 364 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 TLL1O43897 1013 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 ARHGEF15O94989 841 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 LGALS2P05162 132 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 TAP1Q03518 808 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 SEMA3FQ13275 785 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 COL9A3Q14050 684 aaPredicted RBP21.31■■□□□ 1
SREBF1-206ENST00000423161 NEDD9Q14511 834 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 RTEL1Q9NZ71 1219 aa21.31■■□□□ 1
SREBF1-206ENST00000423161 C17orf102A2RUQ5 167 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 SPATA31C2B4DYI2 1134 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 H3BRB1 525 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 RFXAPO00287 272 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 RXRAP19793 462 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 LIFRP42702 1097 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 DEFB103AP81534 67 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 TCTN1Q2MV58 587 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 CREB3L3Q68CJ9 461 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms