RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 SPATA31C2B4DYI2 1134 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 FIBPO43427 364 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 TDP2O95551 362 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 TGFB3P10600 412 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 MTMR1Q13613 665 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 TRPV1Q8NER1 839 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 SH3TC2Q8TF17 1288 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
CAST-208ENST00000421689 PDGFCQ9NRA1 345 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 KCNH7Q9NS40 1196 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 DDX25Q9UHL0 483 aaKnown RBP13.38□□□□□ -0.27
CAST-208ENST00000421689 FAM184BQ9ULE4 1060 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 MRVI1Q9Y6F6 885 aa13.38□□□□□ -0.27
CAST-208ENST00000421689 WNT7AO00755 349 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 SEPT4O43236 478 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 ARP10275 920 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
CAST-208ENST00000421689 AKR1A1P14550 325 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 CNGA1P29973 690 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 MCM7P33993 719 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 ADCYAP1R1P41586 468 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 ZNF174Q15697 407 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 LENG9Q96B70 501 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 ZNF396Q96N95 335 aaPredicted RBP13.37□□□□□ -0.27
CAST-208ENST00000421689 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 AGO4Q9HCK5 861 aaKnown RBP13.37□□□□□ -0.27
CAST-208ENST00000421689 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
CAST-208ENST00000421689 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
CAST-208ENST00000421689 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
CAST-208ENST00000421689 TBX3O15119 743 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 NKRFO15226 690 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAST-208ENST00000421689 SLC37A4O43826 429 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 NEMFO60524 1076 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
CAST-208ENST00000421689 TNFAIP2Q03169 654 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 NEDD9Q14511 834 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 DUSP28Q4G0W2 176 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
CAST-208ENST00000421689 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 MCOLN1Q9GZU1 580 aa13.36□□□□□ -0.27
CAST-208ENST00000421689 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.35□□□□□ -0.27
CAST-208ENST00000421689 IPO5O00410 1097 aaKnown RBP13.35□□□□□ -0.27
CAST-208ENST00000421689 MSH4O15457 936 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 MARCH6O60337 910 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 ATP9AO75110 1047 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 ARIH2O95376 493 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 BAG4O95429 457 aaKnown RBP13.35□□□□□ -0.27
CAST-208ENST00000421689 BMP15O95972 392 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 SMPD1P17405 629 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 NBR1Q14596 966 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 LY6KQ17RY6 165 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 ETNPPLQ8TBG4 499 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 FAM20AQ96MK3 541 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 ZNF577Q9BSK1 485 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 TBC1D22BQ9NU19 505 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 Q9Y3F1 56 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 DOCK5Q9H7D0 1870 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 NFASCO94856 1347 aa13.35□□□□□ -0.27
CAST-208ENST00000421689 LAD1O00515 517 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 MSCO60682 206 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 DUSP11O75319 330 aaKnown RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 GH1P01241 217 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 KCNA2P16389 499 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 SP2Q02086 613 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 PTGDRQ13258 359 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 CALCRLQ16602 461 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 FOXD4L6Q3SYB3 417 aaPredicted RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 ANO1Q5XXA6 986 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 FOXD4L3Q6VB84 417 aaPredicted RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 SLC5A5Q92911 643 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 ZNF333Q96JL9 665 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 RIT2Q99578 217 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 SDF4Q9BRK5 362 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
CAST-208ENST00000421689 UNC93B1Q9H1C4 597 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 POLR3EQ9NVU0 708 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 PKD2L1Q9P0L9 805 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 DDX20Q9UHI6 824 aaKnown RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
CAST-208ENST00000421689 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
CAST-208ENST00000421689 ADCY6O43306 1168 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 GGPS1O95749 300 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 OR52Z1P0C646 297 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 RARBP10826 455 aa13.33□□□□□ -0.28
CAST-208ENST00000421689 CCL5P13501 91 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms