RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PKD2L1Q9P0L9 805 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 CLIC4Q9Y696 253 aa17.83■□□□□ 0.44
DDX55-203ENST00000421670 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
DDX55-203ENST00000421670 GRK4P32298 578 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 SETQ01105 290 aaPredicted RBP17.82■□□□□ 0.44
DDX55-203ENST00000421670 CACNB2Q08289 660 aaPredicted RBP17.82■□□□□ 0.44
DDX55-203ENST00000421670 Q4G0T1 1027 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 TAPT1Q6NXT6 567 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 NLRX1Q86UT6 975 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 GJA10Q969M2 543 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 GPRASP2Q96D09 838 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 NAP1L4Q99733 375 aaKnown RBP17.82■□□□□ 0.44
DDX55-203ENST00000421670 TFIP11Q9UBB9 837 aaKnown RBP17.82■□□□□ 0.44
DDX55-203ENST00000421670 ATP6V1DQ9Y5K8 247 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 MRVI1Q9Y6F6 885 aa17.82■□□□□ 0.44
DDX55-203ENST00000421670 ARIH2O95376 493 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 INHAP05111 366 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 ZNF865P0CJ78 1059 aaPredicted RBP17.81■□□□□ 0.44
DDX55-203ENST00000421670 CYBAP13498 195 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 ADCYAP1R1P41586 468 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
DDX55-203ENST00000421670 TMEM63BQ5T3F8 832 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 NIPA1Q7RTP0 329 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 TRPV1Q8NER1 839 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 TMEM60Q9H2L4 133 aa17.81■□□□□ 0.44
DDX55-203ENST00000421670 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.8■□□□□ 0.44
DDX55-203ENST00000421670 MSH4O15457 936 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 ADCY6O43306 1168 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 FIBPO43427 364 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
DDX55-203ENST00000421670 PTGS1P23219 599 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 CCDC144BQ3MJ40 725 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 ANO1Q5XXA6 986 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 ETNPPLQ8TBG4 499 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
DDX55-203ENST00000421670 ZNF396Q96N95 335 aaPredicted RBP17.8■□□□□ 0.44
DDX55-203ENST00000421670 DNAH12Q6ZR08 3092 aa17.8■□□□□ 0.44
DDX55-203ENST00000421670 SPATA31C2B4DYI2 1134 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 SORBS3O60504 671 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 ATP9AO75110 1047 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 UBA1P22314 1058 aaKnown RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 SP2Q02086 613 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 PTGDRQ13258 359 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 CALCRLQ16602 461 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 LY6KQ17RY6 165 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 GJC2Q5T442 439 aaPredicted RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 SCFD2Q8WU76 684 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 LENG1Q96BZ8 264 aaPredicted RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 ZNF577Q9BSK1 485 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 AGO4Q9HCK5 861 aaKnown RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 IPO5O00410 1097 aaKnown RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 CCND3P30281 292 aaPredicted RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 ICAM3P32942 547 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 MAP3K21Q5TCX8 1036 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 FBXO46Q6PJ61 603 aaPredicted RBP17.79■□□□□ 0.44
DDX55-203ENST00000421670 C4orf32Q8N8J7 132 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 HAS1Q92839 578 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 CDHR1Q96JP9 859 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 BCAS3Q9H6U6 928 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 POLR3EQ9NVU0 708 aa17.79■□□□□ 0.44
DDX55-203ENST00000421670 RBM47A0AV96 593 aaKnown RBP17.78■□□□□ 0.44
DDX55-203ENST00000421670 OR52Z1P0C646 297 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 TXNP10599 105 aaKnown RBP17.78■□□□□ 0.44
DDX55-203ENST00000421670 KCNA2P16389 499 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 CNGA1P29973 690 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 NASPP49321 788 aaPredicted RBP17.78■□□□□ 0.44
DDX55-203ENST00000421670 KRT85P78386 507 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 TTLL4Q14679 1199 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 PTPAQ15257 358 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
DDX55-203ENST00000421670 COPS5Q92905 334 aa17.78■□□□□ 0.44
DDX55-203ENST00000421670 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
DDX55-203ENST00000421670 DDX39AO00148 427 aaKnown RBP17.77■□□□□ 0.44
DDX55-203ENST00000421670 MARCH6O60337 910 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 SMPD1P17405 629 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 ATP2C1P98194 919 aaPredicted RBP17.77■□□□□ 0.44
DDX55-203ENST00000421670 STK38Q15208 465 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 SLC5A5Q92911 643 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 MTMR9Q96QG7 549 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 NRBP1Q9UHY1 535 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 CEP131Q9UPN4 1083 aa17.77■□□□□ 0.44
DDX55-203ENST00000421670 MAFGO15525 162 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 MYCP01106 439 aaPredicted RBP17.76■□□□□ 0.43
DDX55-203ENST00000421670 TGFB3P10600 412 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 TXKP42681 527 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 TNFAIP2Q03169 654 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 PKN2Q16513 984 aaKnown RBP17.76■□□□□ 0.43
DDX55-203ENST00000421670 LRCH2Q5VUJ6 765 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 ATL3Q6DD88 541 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 KCNV1Q6PIU1 500 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 GDPD2Q9HCC8 539 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 CFAP45Q9UL16 551 aa17.76■□□□□ 0.43
DDX55-203ENST00000421670 TBX3O15119 743 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 DHX15O43143 795 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms