RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 SLC9A7Q96T83 725 aa21.88■■□□□ 1.09
VARS2-202ENST00000421263 SPZ1Q9BXG8 430 aa21.88■■□□□ 1.09
VARS2-202ENST00000421263 FTOQ9C0B1 505 aaKnown RBP eCLIP21.88■■□□□ 1.09
VARS2-202ENST00000421263 LSG1Q9H089 658 aaKnown RBP21.88■■□□□ 1.09
VARS2-202ENST00000421263 DDAH1O94760 285 aa21.87■■□□□ 1.09
VARS2-202ENST00000421263 PARNO95453 639 aaKnown RBP21.87■■□□□ 1.09
VARS2-202ENST00000421263 GGPS1O95749 300 aa21.87■■□□□ 1.09
VARS2-202ENST00000421263 SELPP16109 830 aa21.87■■□□□ 1.09
VARS2-202ENST00000421263 MRPS9P82933 396 aaKnown RBP21.87■■□□□ 1.09
VARS2-202ENST00000421263 GPKOWQ92917 476 aaPredicted RBP eCLIP21.87■■□□□ 1.09
VARS2-202ENST00000421263 ALG1Q9BT22 464 aa21.87■■□□□ 1.09
VARS2-202ENST00000421263 STAM2O75886 525 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 BAIAP3O94812 1187 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 CXCL10P02778 98 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 ZNF286BP0CG31 522 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 CKBP12277 381 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 UBA1P22314 1058 aaKnown RBP21.86■■□□□ 1.09
VARS2-202ENST00000421263 ICAM3P32942 547 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 PTK7Q13308 1070 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 NECTIN1Q15223 517 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 TRIM71Q2Q1W2 868 aaKnown RBP21.86■■□□□ 1.09
VARS2-202ENST00000421263 PPP2R2DQ66LE6 453 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 LRRC8DQ7L1W4 858 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 TMTC2Q8N394 836 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 ZFP91Q96JP5 570 aaPredicted RBP21.86■■□□□ 1.09
VARS2-202ENST00000421263 SPATA33Q96N06 139 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 C16orf70Q9BSU1 422 aa21.86■■□□□ 1.09
VARS2-202ENST00000421263 PRC1O43663 620 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 MCM5P33992 734 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 COL9A3Q14050 684 aaPredicted RBP21.85■■□□□ 1.09
VARS2-202ENST00000421263 HIC1Q14526 733 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 TRAF7Q6Q0C0 670 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 CTCFLQ8NI51 663 aaPredicted RBP21.85■■□□□ 1.09
VARS2-202ENST00000421263 TMEM87BQ96K49 555 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 INPP4AQ96PE3 977 aaPredicted RBP21.85■■□□□ 1.09
VARS2-202ENST00000421263 LZTS2Q9BRK4 669 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 ESYT1Q9BSJ8 1104 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 MYL10Q9BUA6 226 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 BCAS3Q9H6U6 928 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 PRDM6Q9NQX0 595 aa21.85■■□□□ 1.09
VARS2-202ENST00000421263 SPATA31C2B4DYI2 1134 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 PIK3CDO00329 1044 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 SH2B2O14492 632 aaPredicted RBP21.84■■□□□ 1.09
VARS2-202ENST00000421263 NBNO60934 754 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 CA3P07451 260 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 POU3F3P20264 500 aaPredicted RBP21.84■■□□□ 1.09
VARS2-202ENST00000421263 IGFBP4P22692 258 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 KIF5BP33176 963 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 LIFRP42702 1097 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 HERC6Q8IVU3 1022 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 SYMPKQ92797 1274 aaKnown RBP21.84■■□□□ 1.09
VARS2-202ENST00000421263 RRP36Q96EU6 259 aaKnown RBP21.84■■□□□ 1.09
VARS2-202ENST00000421263 MLXIPQ9HAP2 919 aa21.84■■□□□ 1.09
VARS2-202ENST00000421263 MEIS2O14770 477 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 SLC27A2O14975 620 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 HOXC8P31273 242 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 GNAQP50148 359 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 ZNF200P98182 395 aaPredicted RBP21.83■■□□□ 1.09
VARS2-202ENST00000421263 SEMA3FQ13275 785 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 GNPTABQ3T906 1256 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 TJAP1Q5JTD0 557 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 SRBD1Q8N5C6 995 aaKnown RBP21.83■■□□□ 1.09
VARS2-202ENST00000421263 ATXN2LQ8WWM7 1075 aaKnown RBP21.83■■□□□ 1.09
VARS2-202ENST00000421263 PIBF1Q8WXW3 757 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 PPM1EQ8WY54 764 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 WNT8BQ93098 351 aa21.83■■□□□ 1.09
VARS2-202ENST00000421263 TRANK1O15050 2925 aa21.83■■□□□ 1.08
VARS2-202ENST00000421263 SORBS3O60504 671 aa21.82■■□□□ 1.08
VARS2-202ENST00000421263 WDR5P61964 334 aaKnown RBP21.82■■□□□ 1.08
VARS2-202ENST00000421263 ZNF618Q5T7W0 954 aa21.82■■□□□ 1.08
VARS2-202ENST00000421263 CNKSR3Q6P9H4 555 aa21.82■■□□□ 1.08
VARS2-202ENST00000421263 KIF28PB7ZC32 967 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 H3BRB1 525 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 TAP1Q03518 808 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 NEDD9Q14511 834 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 CCDC85BQ15834 202 aaPredicted RBP21.81■■□□□ 1.08
VARS2-202ENST00000421263 TCTN1Q2MV58 587 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 CREB3L3Q68CJ9 461 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 XRRA1Q6P2D8 792 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 USP17L6PQ6QN14 398 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 SERINC5Q86VE9 423 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 TUT1Q9H6E5 874 aaKnown RBP21.81■■□□□ 1.08
VARS2-202ENST00000421263 RTEL1Q9NZ71 1219 aa21.81■■□□□ 1.08
VARS2-202ENST00000421263 CCDC69A6NI79 296 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 FIBPO43427 364 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 ARHGEF15O94989 841 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 PLEKHA8P1O95397 391 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 LGALS2P05162 132 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 CALM1P0DP23 149 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 CALM2P0DP24 149 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 CALM3P0DP25 149 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 MBTPS1Q14703 1052 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 PCNX4Q63HM2 1172 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 METTL7BQ6UX53 244 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 SMARCC2Q8TAQ2 1214 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 SENP7Q9BQF6 1050 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 PTPRSQ13332 1948 aa21.8■■□□□ 1.08
VARS2-202ENST00000421263 REV3LO60673 3130 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms