RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 VSIG10LQ86VR7 867 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 PXYLP1Q8TE99 480 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 SCFD2Q8WU76 684 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 TNFRSF25Q93038 417 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 GPRASP2Q96D09 838 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 SDF4Q9BRK5 362 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 PRDM10Q9NQV6 1147 aa9.59□□□□□ -0.87
TRIM48-201ENST00000417545 DDX49Q9Y6V7 483 aaKnown RBP9.59□□□□□ -0.87
TRIM48-201ENST00000417545 MAFGO15525 162 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 INHAP05111 366 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 TXNP10599 105 aaKnown RBP9.58□□□□□ -0.88
TRIM48-201ENST00000417545 AKR1A1P14550 325 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 EDNRBP24530 442 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 MRPS9P82933 396 aaKnown RBP9.58□□□□□ -0.88
TRIM48-201ENST00000417545 NBR1Q14596 966 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 NIPA1Q7RTP0 329 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 GIMAP8Q8ND71 665 aaPredicted RBP9.58□□□□□ -0.88
TRIM48-201ENST00000417545 SH3TC2Q8TF17 1288 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 FGD4Q96M96 766 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 TEKT3Q9BXF9 490 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 RAB34Q9BZG1 259 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 WDR11Q9BZH6 1224 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 MLXIPQ9HAP2 919 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 SPC25Q9HBM1 224 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 JADE2Q9NQC1 790 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 FLRT1Q9NZU1 646 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 NRBP1Q9UHY1 535 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 FAM184BQ9ULE4 1060 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 UBIAD1Q9Y5Z9 338 aa9.58□□□□□ -0.88
TRIM48-201ENST00000417545 ASTN1O14525 1302 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 DDX39AO00148 427 aaKnown RBP9.57□□□□□ -0.88
TRIM48-201ENST00000417545 NOP56O00567 594 aaKnown RBP9.57□□□□□ -0.88
TRIM48-201ENST00000417545 GAS7O60861 476 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 MYCP01106 439 aaPredicted RBP9.57□□□□□ -0.88
TRIM48-201ENST00000417545 OR52Z1P0C646 297 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 CAP1Q01518 475 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 SP4Q02446 784 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 TNFAIP2Q03169 654 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 NEDD9Q14511 834 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 CSPP1Q1MSJ5 1256 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 CCDC144BQ3MJ40 725 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 Q4G0T1 1027 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 BRDTQ58F21 947 aaPredicted RBP9.57□□□□□ -0.88
TRIM48-201ENST00000417545 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 LRCH2Q5VUJ6 765 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 ANO1Q5XXA6 986 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 ATL3Q6DD88 541 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 PPP4R3AQ6IN85 833 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 FAM173BQ6P4H8 233 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 SLFN12Q8IYM2 578 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 MORC4Q8TE76 937 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 UIMC1Q96RL1 719 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 AP5M1Q9H0R1 490 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 HMX1Q9NP08 348 aaPredicted RBP9.57□□□□□ -0.88
TRIM48-201ENST00000417545 SAMM50Q9Y512 469 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 PCDHB6Q9Y5E3 794 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 DOCK5Q9H7D0 1870 aa9.57□□□□□ -0.88
TRIM48-201ENST00000417545 FAM86B1E9PN63 330 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 IPO5O00410 1097 aaKnown RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 LAD1O00515 517 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 NKRFO15226 690 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 SLC37A4O43826 429 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 SORBS3O60504 671 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 GGPS1O95749 300 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 SNAI1O95863 264 aaPredicted RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 FAM86B2P0C5J1 330 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TGFB3P10600 412 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 RARBP10826 455 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 ITGB5P18084 799 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CIITAP33076 1130 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 ADCYAP1R1P41586 468 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TXKP42681 527 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 DNM1Q05193 864 aaKnown RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CACNB2Q08289 660 aaPredicted RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 PTGDRQ13258 359 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 IQSEC1Q6DN90 963 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 DHX37Q8IY37 1157 aaKnown RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 OR6J1Q8NGC5 347 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 RASSF8Q8NHQ8 419 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 FAM20AQ96MK3 541 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 INPP4AQ96PE3 977 aaPredicted RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 GBP4Q96PP9 640 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 KCNH7Q9NS40 1196 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TBC1D22BQ9NU19 505 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CYP3A7-CYP3A51PA0A087WV96 503 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 GOLGA6L4A6NEF3 574 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 GOLGA6L22H0YM25 854 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 MEIS1O00470 390 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 TBX3O15119 743 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 MSH4O15457 936 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 SEPT4O43236 478 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CHMP2AO43633 222 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 MSCO60682 206 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 GH1P01241 217 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 ARP10275 920 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CYBAP13498 195 aa9.56□□□□□ -0.88
TRIM48-201ENST00000417545 CYP3A7P24462 503 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms