RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 VPS52Q8N1B4 723 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 ZFP91Q96JP5 570 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-202ENST00000413872 OGFRQ9NZT2 677 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 PFDN6O15212 129 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 CCNE1P24864 410 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 GBP1P32455 592 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 PKP1Q13835 747 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 STXBP2Q15833 593 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 HHATQ5VTY9 493 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 TDRD7Q8NHU6 1098 aaKnown RBP18.85■□□□□ 0.61
PHRF1-202ENST00000413872 SNX25Q9H3E2 840 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 ZNF233A6NK53 670 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 PHBP35232 272 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 BARGINQ6ZT62 677 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 SPATA24Q86W54 205 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 NLRP7Q8WX94 980 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 ABL1P00519 1130 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 EMILIN3Q9NT22 766 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 MYO1FO00160 1098 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 GPSM2P81274 684 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 PPP2R5DQ14738 602 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 TYW1Q9NV66 732 aaKnown RBP18.84■□□□□ 0.61
PHRF1-202ENST00000413872 RWDD2AQ9UIY3 292 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 ZHX2Q9Y6X8 837 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
PHRF1-202ENST00000413872 KRIT1O00522 736 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 THAP12O43422 761 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 BIRC2Q13490 618 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 DENND2CQ68D51 928 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 RINT1Q6NUQ1 792 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 TBC1D22BQ9NU19 505 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 PPP2R2CQ9Y2T4 447 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 ATP8B3O60423 1300 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 SPATA31A1Q5TZJ5 1347 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 MED7O43513 233 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 IFNB1P01574 187 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 KRT15P19012 456 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 HPDP32754 393 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-202ENST00000413872 MYO1EQ12965 1108 aa18.84■□□□□ 0.61
PHRF1-202ENST00000413872 PFKFB3Q16875 520 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-202ENST00000413872 GNAT1P11488 350 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 NEK9Q8TD19 979 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 RNF181Q9P0P0 153 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 A6NJR5 290 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 NBPF26B4DH59 902 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 EIF3CLB5ME19 914 aaKnown RBP18.83■□□□□ 0.61
PHRF1-202ENST00000413872 LRRC63Q05C16 580 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 RESTQ13127 1097 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.61
PHRF1-202ENST00000413872 NBPF15Q8N660 670 aa18.83■□□□□ 0.61
PHRF1-202ENST00000413872 EIF3CQ99613 913 aaKnown RBP18.83■□□□□ 0.61
PHRF1-202ENST00000413872 TYW5A2RUC4 315 aaKnown RBP18.83■□□□□ 0.6
PHRF1-202ENST00000413872 CDC25BP30305 580 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 MAN1A1P33908 653 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 LMNB2Q03252 620 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 B4GALNT4Q76KP1 1039 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 BBS5Q8N3I7 341 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.6
PHRF1-202ENST00000413872 VPS37BQ9H9H4 285 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 HSPA1LP34931 641 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 SF3B3Q15393 1217 aaKnown RBP18.83■□□□□ 0.6
PHRF1-202ENST00000413872 RABL6Q3YEC7 729 aaPredicted RBP18.83■□□□□ 0.6
PHRF1-202ENST00000413872 MCPH1Q8NEM0 835 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 E9PCH4 1651 aa18.83■□□□□ 0.6
PHRF1-202ENST00000413872 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 I3L4J1 428 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 RIOK3O14730 519 aaKnown RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 PLCG1P19174 1290 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 CACNB3P54284 484 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 ENOX1Q8TC92 643 aaKnown RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 NSUN6Q8TEA1 469 aaKnown RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 FAM20AQ96MK3 541 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 THAP9Q9H5L6 903 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 PNPLA7Q6ZV29 1317 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 TBC1D8O95759 1140 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 RNASELQ05823 741 aaKnown RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 FAM83BQ5T0W9 1011 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 GPT2Q8TD30 523 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 SPON1Q9HCB6 807 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 LDHAP00338 332 aaKnown RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 FOXO4P98177 505 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 MRRFQ96E11 262 aaKnown RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 PCDHA6Q9UN73 950 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 PCDHA8Q9Y5H6 950 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 LRRC7Q96NW7 1537 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 IRX5P78411 483 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 PALM2Q8IXS6 379 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
PHRF1-202ENST00000413872 RMDN3Q96TC7 470 aa18.82■□□□□ 0.6
PHRF1-202ENST00000413872 HOXA13P31271 388 aaPredicted RBP18.81■□□□□ 0.6
PHRF1-202ENST00000413872 KRT76Q01546 638 aa18.81■□□□□ 0.6
PHRF1-202ENST00000413872 EEPD1Q7L9B9 569 aa18.81■□□□□ 0.6
PHRF1-202ENST00000413872 PCDHB6Q9Y5E3 794 aa18.81■□□□□ 0.6
PHRF1-202ENST00000413872 CYP2D6P10635 497 aa18.81■□□□□ 0.6
PHRF1-202ENST00000413872 GRM4Q14833 912 aa18.81■□□□□ 0.6
PHRF1-202ENST00000413872 TBC1D10CQ8IV04 446 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms