RNA–Protein interactions for RNA: ENST00000413241.5

HDLBP-205, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-205ENST00000413241 HAS3O00219 553 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 STAM2O75886 525 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 HOXD8P13378 290 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-205ENST00000413241 KIF5BP33176 963 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 PSEN2P49810 448 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 ANAPC15P60006 121 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 RBL2Q08999 1139 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 CELF3Q5SZQ8 465 aaKnown RBP11.76□□□□□ -0.53
HDLBP-205ENST00000413241 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-205ENST00000413241 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
HDLBP-205ENST00000413241 SPATA33Q96N06 139 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 FTOQ9C0B1 505 aaKnown RBP eCLIP11.76□□□□□ -0.533e-8■■■■□ 24.2
HDLBP-205ENST00000413241 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 SCN5AQ14524 2016 aa11.76□□□□□ -0.53
HDLBP-205ENST00000413241 DDAH1O94760 285 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 GGPS1O95749 300 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 ZNF286BP0CG31 522 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 SELPP16109 830 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 UBA1P22314 1058 aaKnown RBP11.75□□□□□ -0.53
HDLBP-205ENST00000413241 SMARCA1P28370 1054 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 MCM5P33992 734 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 SP2Q02086 613 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 PTK7Q13308 1070 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 MFSD10Q14728 455 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 HSDL1Q3SXM5 330 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 ZNF654Q8IZM8 581 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 IL31RAQ8NI17 732 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
HDLBP-205ENST00000413241 RRP36Q96EU6 259 aaKnown RBP11.75□□□□□ -0.53
HDLBP-205ENST00000413241 TMEM87BQ96K49 555 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 CTAGE1Q96RT6 745 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 LZTS2Q9BRK4 669 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 MLXIPQ9HAP2 919 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 VCANP13611 3396 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 TRANK1O15050 2925 aa11.75□□□□□ -0.53
HDLBP-205ENST00000413241 REV3LO60673 3130 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 KIF28PB7ZC32 967 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 PRC1O43663 620 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 CKBP12277 381 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 MYOGP15173 224 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 IGFBP4P22692 258 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 LIFRP42702 1097 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 KCNJ6P48051 423 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 GNAQP50148 359 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 ADGRE1Q14246 886 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 NFXL1Q6ZNB6 911 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 LRRC8DQ7L1W4 858 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 CUL5Q93034 780 aa11.74□□□□□ -0.53
HDLBP-205ENST00000413241 SEC63Q9UGP8 760 aaKnown RBP11.74□□□□□ -0.53
HDLBP-205ENST00000413241 SPTBN5Q9NRC6 3674 aaKnown RBP11.74□□□□□ -0.53
HDLBP-205ENST00000413241 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 MYH7BA7E2Y1 1941 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 SH2B2O14492 632 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-205ENST00000413241 SORBS3O60504 671 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CXCL10P02778 98 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CA3P07451 260 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CALM1P0DP23 149 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CALM2P0DP24 149 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CALM3P0DP25 149 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 ICAM3P32942 547 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 MRPS9P82933 396 aaKnown RBP11.73□□□□□ -0.53
HDLBP-205ENST00000413241 NEDD9Q14511 834 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 GPNMBQ14956 572 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 TJAP1Q5JTD0 557 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CNKSR3Q6P9H4 555 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 SYNE3Q6ZMZ3 975 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 HERC6Q8IVU3 1022 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 SMARCC2Q8TAQ2 1214 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 PIBF1Q8WXW3 757 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
HDLBP-205ENST00000413241 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
HDLBP-205ENST00000413241 INPP4AQ96PE3 977 aaPredicted RBP11.73□□□□□ -0.53
HDLBP-205ENST00000413241 C16orf70Q9BSU1 422 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 MYL10Q9BUA6 226 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
HDLBP-205ENST00000413241 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
HDLBP-205ENST00000413241 H3BRB1 525 aa11.72□□□□□ -0.53
HDLBP-205ENST00000413241 NOP56O00567 594 aaKnown RBP11.72□□□□□ -0.53
HDLBP-205ENST00000413241 MEIS2O14770 477 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms