RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 KLRF2D3W0D1 207 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 PLA2G5P39877 138 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 ERVK-21P61565 698 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 TRIM71Q2Q1W2 868 aaKnown RBP19.43■□□□□ 0.7
MRPL55-220ENST00000411464 CELF3Q5SZQ8 465 aaKnown RBP19.43■□□□□ 0.7
MRPL55-220ENST00000411464 MYSM1Q5VVJ2 828 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 STOX1Q6ZVD7 989 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 STAG2Q8N3U4 1231 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 PDCD2LQ9BRP1 358 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 EPHX3Q9H6B9 360 aa19.43■□□□□ 0.7
MRPL55-220ENST00000411464 NCOR1O75376 2440 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 OPLAHO14841 1288 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 ZBTB5O15062 677 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 SORBS3O60504 671 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 LGR5O75473 907 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 ZNF200P98182 395 aaPredicted RBP19.42■□□□□ 0.7
MRPL55-220ENST00000411464 NUCB1Q02818 461 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 TCTN1Q2MV58 587 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 FAM117BQ6P1L5 589 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 VSIG10LQ86VR7 867 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 SAMD3Q8N6K7 520 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 INSL6Q9Y581 213 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 EMSYQ7Z589 1322 aa19.42■□□□□ 0.7
MRPL55-220ENST00000411464 LINC01553A4QN01 128 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 RGS20O76081 388 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 GGPS1O95749 300 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 TGFB3P10600 412 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 HOXD8P13378 290 aaPredicted RBP19.41■□□□□ 0.7
MRPL55-220ENST00000411464 HOXA13P31271 388 aaPredicted RBP19.41■□□□□ 0.7
MRPL55-220ENST00000411464 THPOP40225 353 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 GHRHRQ02643 423 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 TRAF1Q13077 416 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 HSDL1Q3SXM5 330 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 TRAF7Q6Q0C0 670 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 WNT8BQ93098 351 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 MLXIPQ9HAP2 919 aa19.41■□□□□ 0.7
MRPL55-220ENST00000411464 RSPH10B2B2RC85 870 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 PPP1R11O60927 126 aaPredicted RBP19.4■□□□□ 0.7
MRPL55-220ENST00000411464 AMHP03971 560 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 RSPH10BP0C881 870 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 MBTPS1Q14703 1052 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 PGM5Q15124 567 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 SERINC5Q86VE9 423 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 MTMR8Q96EF0 704 aa19.4■□□□□ 0.7
MRPL55-220ENST00000411464 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.69
MRPL55-220ENST00000411464 POLR2MP0CAP2 368 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 CCND2P30279 289 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 SP2Q02086 613 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 TMEM31Q5JXX7 168 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.39■□□□□ 0.69
MRPL55-220ENST00000411464 FCHSD1Q86WN1 690 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 MYOCDQ8IZQ8 938 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 DBF4BQ8NFT6 615 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 ATP6V0A1Q93050 837 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 LRFN3Q9BTN0 628 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
MRPL55-220ENST00000411464 C17orf102A2RUQ5 167 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 PALM3A6NDB9 673 aaPredicted RBP19.38■□□□□ 0.69
MRPL55-220ENST00000411464 UBA1P22314 1058 aaKnown RBP19.38■□□□□ 0.69
MRPL55-220ENST00000411464 TRDNQ13061 729 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 HIC1Q14526 733 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 SEC23AQ15436 765 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 FBXO22Q8NEZ5 403 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 IL31RAQ8NI17 732 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 C16orf70Q9BSU1 422 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 TANC1Q9C0D5 1861 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 UBE2ZQ9H832 354 aaPredicted RBP19.38■□□□□ 0.69
MRPL55-220ENST00000411464 HCN4Q9Y3Q4 1203 aa19.38■□□□□ 0.69
MRPL55-220ENST00000411464 TET1Q8NFU7 2136 aa19.37■□□□□ 0.69
MRPL55-220ENST00000411464 TCF20Q9UGU0 1960 aaKnown RBP19.37■□□□□ 0.69
MRPL55-220ENST00000411464 H3BRB1 525 aa19.37■□□□□ 0.69
MRPL55-220ENST00000411464 NOP56O00567 594 aaKnown RBP19.37■□□□□ 0.69
MRPL55-220ENST00000411464 IGHDP01880 384 aa19.37■□□□□ 0.69
MRPL55-220ENST00000411464 ZFP91Q96JP5 570 aaPredicted RBP19.37■□□□□ 0.69
MRPL55-220ENST00000411464 C17orf80Q9BSJ5 609 aa19.37■□□□□ 0.69
MRPL55-220ENST00000411464 TUT1Q9H6E5 874 aaKnown RBP19.37■□□□□ 0.69
MRPL55-220ENST00000411464 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.36■□□□□ 0.69
MRPL55-220ENST00000411464 SMIM10L2AP0DMW4 78 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 SMIM10L2BP0DMW5 78 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 GNPTABQ3T906 1256 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 PLEKHG4Q58EX7 1191 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 CYB5R4Q7L1T6 521 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 SEPT8Q92599 483 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 PIGSQ96S52 555 aa19.36■□□□□ 0.69
MRPL55-220ENST00000411464 ERICH2A1L162 156 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 LGALS2P05162 132 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 GNAT1P11488 350 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 KCNA5P22460 613 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 HTRA4P83105 476 aaPredicted RBP19.35■□□□□ 0.69
MRPL55-220ENST00000411464 PTPROQ16827 1216 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 LEXMQ3ZCV2 418 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 GPKOWQ92917 476 aaPredicted RBP eCLIP19.35■□□□□ 0.69
MRPL55-220ENST00000411464 USP26Q9BXU7 913 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
MRPL55-220ENST00000411464 ARIH1Q9Y4X5 557 aaPredicted RBP19.35■□□□□ 0.69
MRPL55-220ENST00000411464 PNMA6FA0A0J9YX94 578 aa19.34■□□□□ 0.69
MRPL55-220ENST00000411464 RBAK-RBAKDNI3L0D1 243 aa19.34■□□□□ 0.69
MRPL55-220ENST00000411464 IFIT3O14879 490 aaKnown RBP19.34■□□□□ 0.69
MRPL55-220ENST00000411464 TREHO43280 583 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms