RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 LRRC1Q9BTT6 524 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
CLIP4-204ENST00000404424 IGKV6D-41A0A0C4DH26 115 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 SERPING1P05155 500 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 MARSP56192 900 aaKnown RBP11.87□□□□□ -0.51
CLIP4-204ENST00000404424 GABPAQ06546 454 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 COASYQ13057 564 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
CLIP4-204ENST00000404424 VPS72Q15906 364 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 HGSNATQ68CP4 663 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 FAM76AQ8TAV0 307 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
CLIP4-204ENST00000404424 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 STIM2Q9P246 746 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 DDX25Q9UHL0 483 aaKnown RBP11.87□□□□□ -0.51
CLIP4-204ENST00000404424 C10orf71Q711Q0 1435 aa11.87□□□□□ -0.51
CLIP4-204ENST00000404424 SHOX2O60902 331 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 PPFIA4O75335 1185 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 TTLL1O95922 423 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 MRPL12P52815 198 aaKnown RBP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 CCDC40Q4G0X9 1142 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 SFMBT2Q5VUG0 894 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 NFRKBQ6P4R8 1299 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 CUL5Q93034 780 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 PODXL2Q9NZ53 605 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 DMGDHQ9UI17 866 aaKnown RBP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 GOLGA8KD6RF30 607 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 TRAF5O00463 557 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 OPA1O60313 960 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 CLSTN1O94985 981 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 TNNI2P48788 182 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 RASSF7Q02833 373 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 ZNF543Q08ER8 600 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 NNTQ13423 1086 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 CRY2Q49AN0 593 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 KLHDC7AQ5VTJ3 777 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 KCNK18Q7Z418 384 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 GSPT2Q8IYD1 628 aaKnown RBP11.86□□□□□ -0.51
CLIP4-204ENST00000404424 HAS1Q92839 578 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 ZBTB9Q96C00 473 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 DRC1Q96MC2 740 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 GDAP1L1Q96MZ0 367 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 TLR10Q9BXR5 811 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 GLT8D2Q9H1C3 349 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 SWAP70Q9UH65 585 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 NHSQ6T4R5 1651 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 BTAF1O14981 1849 aa11.86□□□□□ -0.51
CLIP4-204ENST00000404424 GOLGA6CA6NDK9 693 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 MARCH6O60337 910 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 GOLGA6DP0CG33 693 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 PPFIA1Q13136 1202 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 LRRC41Q15345 812 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 GPATCH4Q5T3I0 446 aaKnown RBP11.85□□□□□ -0.51
CLIP4-204ENST00000404424 GBP6Q6ZN66 633 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 SLC51AQ86UW1 340 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 CCDC65Q8IXS2 484 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 RIN2Q8WYP3 895 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-204ENST00000404424 CAVIN3Q969G5 261 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
CLIP4-204ENST00000404424 GOLGA6AQ9NYA3 693 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 PCDHA12Q9UN75 941 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 SUGT1Q9Y2Z0 365 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 A6NNZ2 444 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 BBOX1O75936 387 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
CLIP4-204ENST00000404424 ECM1Q16610 540 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 TUBB8Q3ZCM7 444 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 HAUS3Q68CZ6 603 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 LRRC47Q8N1G4 583 aaKnown RBP11.85□□□□□ -0.51
CLIP4-204ENST00000404424 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 SH3GL2Q99962 352 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 LCMT1Q9UIC8 334 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 SALL4Q9UJQ4 1053 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 ATP6V0A2Q9Y487 856 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
CLIP4-204ENST00000404424 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 NOL4O94818 638 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 AKR1B1P15121 316 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 SLC1A4P43007 532 aa11.84□□□□□ -0.51
CLIP4-204ENST00000404424 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
CLIP4-204ENST00000404424 C8orf74Q6P047 294 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms