RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 LHX8Q68G74 356 aa33.36■■■□□ 2.93
USP42-202ENST00000404008 MOXD1Q6UVY6 613 aa33.36■■■□□ 2.93
USP42-202ENST00000404008 DDX41Q9UJV9 622 aaKnown RBP33.36■■■□□ 2.93
USP42-202ENST00000404008 ANO1Q5XXA6 986 aa33.35■■■□□ 2.93
USP42-202ENST00000404008 CDHR1Q96JP9 859 aa33.35■■■□□ 2.93
USP42-202ENST00000404008 GNEQ9Y223 722 aaKnown RBP33.35■■■□□ 2.93
USP42-202ENST00000404008 MAFGO15525 162 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 TDP2O95551 362 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 RARBP10826 455 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 PDIA4P13667 645 aaKnown RBP33.34■■■□□ 2.93
USP42-202ENST00000404008 LY6KQ17RY6 165 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 TNS4Q8IZW8 715 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 LENG9Q96B70 501 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 ABHD8Q96I13 439 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 MBOAT7Q96N66 472 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 DEFB118Q96PH6 123 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 KCNH7Q9NS40 1196 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 DUSP11O75319 330 aaKnown RBP33.34■■■□□ 2.93
USP42-202ENST00000404008 GJB1P08034 283 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 SETQ01105 290 aaPredicted RBP33.34■■■□□ 2.93
USP42-202ENST00000404008 SP2Q02086 613 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 PRR16Q569H4 304 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 GJC2Q5T442 439 aaPredicted RBP33.34■■■□□ 2.93
USP42-202ENST00000404008 PPP4R3AQ6IN85 833 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 PLA2G4DQ86XP0 818 aa33.34■■■□□ 2.93
USP42-202ENST00000404008 NAP1L4Q99733 375 aaKnown RBP33.34■■■□□ 2.93
USP42-202ENST00000404008 NKRFO15226 690 aaKnown RBP eCLIP33.33■■■□□ 2.93
USP42-202ENST00000404008 ARP10275 920 aa33.33■■■□□ 2.93
USP42-202ENST00000404008 GCFC2P16383 781 aaKnown RBP33.33■■■□□ 2.93
USP42-202ENST00000404008 PTGS1P23219 599 aa33.33■■■□□ 2.93
USP42-202ENST00000404008 Q4G0T1 1027 aa33.33■■■□□ 2.93
USP42-202ENST00000404008 FERMT3Q86UX7 667 aa33.33■■■□□ 2.93
USP42-202ENST00000404008 CCNT1O60563 726 aaKnown RBP33.32■■■□□ 2.92
USP42-202ENST00000404008 UBA1P22314 1058 aaKnown RBP33.32■■■□□ 2.92
USP42-202ENST00000404008 MYH15Q9Y2K3 1946 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 WNT7AO00755 349 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 TRAPPC10P48553 1259 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 BRAPQ7Z569 592 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 TLK2Q86UE8 772 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 COPS5Q92905 334 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 SENP7Q9BQF6 1050 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 TMEM106CQ9BVX2 250 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 AGO4Q9HCK5 861 aaKnown RBP33.31■■■□□ 2.92
USP42-202ENST00000404008 XPNPEP3Q9NQH7 507 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 DDX25Q9UHL0 483 aaKnown RBP33.31■■■□□ 2.92
USP42-202ENST00000404008 NOL7Q9UMY1 257 aaKnown RBP33.31■■■□□ 2.92
USP42-202ENST00000404008 Q9Y3F1 56 aa33.31■■■□□ 2.92
USP42-202ENST00000404008 SYNRGQ9UMZ2 1314 aa33.3■■■□□ 2.92
USP42-202ENST00000404008 ATP9AO75110 1047 aa33.3■■■□□ 2.92
USP42-202ENST00000404008 KCNA2P16389 499 aa33.3■■■□□ 2.92
USP42-202ENST00000404008 RESTQ13127 1097 aa33.3■■■□□ 2.92
USP42-202ENST00000404008 SLC37A4O43826 429 aa33.29■■■□□ 2.92
USP42-202ENST00000404008 SGPL1O95470 568 aa33.29■■■□□ 2.92
USP42-202ENST00000404008 TOB1P50616 345 aaPredicted RBP33.29■■■□□ 2.92
USP42-202ENST00000404008 ARHGAP1Q07960 439 aa33.29■■■□□ 2.92
USP42-202ENST00000404008 PKP1Q13835 747 aa33.29■■■□□ 2.92
USP42-202ENST00000404008 U2AF1L4Q8WU68 220 aaKnown RBP33.29■■■□□ 2.92
USP42-202ENST00000404008 CRISPLD2Q9H0B8 497 aa33.29■■■□□ 2.92
USP42-202ENST00000404008 UPF3AQ9H1J1 476 aaKnown RBP33.29■■■□□ 2.92
USP42-202ENST00000404008 DAXXQ9UER7 740 aaPredicted RBP33.29■■■□□ 2.92
USP42-202ENST00000404008 GH1P01241 217 aa33.28■■■□□ 2.92
USP42-202ENST00000404008 GJA8P48165 433 aa33.28■■■□□ 2.92
USP42-202ENST00000404008 GJA9P57773 515 aa33.28■■■□□ 2.92
USP42-202ENST00000404008 NEDD9Q14511 834 aa33.28■■■□□ 2.92
USP42-202ENST00000404008 EMID1Q96A84 441 aaPredicted RBP33.28■■■□□ 2.92
USP42-202ENST00000404008 PKD2L1Q9P0L9 805 aa33.28■■■□□ 2.92
USP42-202ENST00000404008 POTEFA5A3E0 1075 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 ADAMTS4O75173 837 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 GGPS1O95749 300 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 ATP2B1P20020 1258 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 CELF3Q5SZQ8 465 aaKnown RBP33.27■■■□□ 2.92
USP42-202ENST00000404008 GIMAP8Q8ND71 665 aaPredicted RBP33.27■■■□□ 2.92
USP42-202ENST00000404008 OR6J1Q8NGC5 347 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 BCAS3Q9H6U6 928 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 OGDHLQ9ULD0 1010 aa33.27■■■□□ 2.92
USP42-202ENST00000404008 IPO5O00410 1097 aaKnown RBP33.26■■■□□ 2.92
USP42-202ENST00000404008 MSH4O15457 936 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 DYNC1LI2O43237 492 aaPredicted RBP33.26■■■□□ 2.92
USP42-202ENST00000404008 PGK1P00558 417 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 ZSCAN22P10073 491 aaPredicted RBP33.26■■■□□ 2.92
USP42-202ENST00000404008 NKX3-2P78367 333 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 ITGB3BPQ13352 177 aaPredicted RBP33.26■■■□□ 2.92
USP42-202ENST00000404008 RILPL1Q5EBL4 403 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 TTC38Q5R3I4 469 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 MYSM1Q5VVJ2 828 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 DHX37Q8IY37 1157 aaKnown RBP33.26■■■□□ 2.92
USP42-202ENST00000404008 ZNF577Q9BSK1 485 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 AP5M1Q9H0R1 490 aa33.26■■■□□ 2.92
USP42-202ENST00000404008 ZSCAN16Q9H4T2 348 aaPredicted RBP33.26■■■□□ 2.92
USP42-202ENST00000404008 CYFIP1Q7L576 1253 aa33.25■■■□□ 2.91
USP42-202ENST00000404008 POTEDQ86YR6 584 aa33.25■■■□□ 2.91
USP42-202ENST00000404008 ETNPPLQ8TBG4 499 aa33.25■■■□□ 2.91
USP42-202ENST00000404008 NFASCO94856 1347 aa33.25■■■□□ 2.91
USP42-202ENST00000404008 CTAGE5O15320 804 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 DDIT3P35638 169 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 ORC2Q13416 577 aaPredicted RBP33.24■■■□□ 2.91
USP42-202ENST00000404008 LAMC2Q13753 1193 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 NBR1Q14596 966 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 METTL7BQ6UX53 244 aa33.24■■■□□ 2.91
USP42-202ENST00000404008 UIMC1Q96RL1 719 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms