RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 MROH9Q5TGP6 573 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 RIOX2Q8IUF8 465 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 LEO1Q8WVC0 666 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 EPB41L1Q9H4G0 881 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 B4E1Z4 1266 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 KCNK3O14649 394 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 DGKIO75912 1065 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 APPP05067 770 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 PDE6AP16499 860 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 KRT15P19012 456 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 POU3F2P20265 443 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 CNGA1P29973 690 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 FLT3P36888 993 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 ERVFRD-1P60508 538 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 KCNMB1Q16558 191 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 PTPROQ16827 1216 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 TMEM177Q53S58 311 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 FAM47CQ5HY64 1035 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 UBE2R2Q712K3 238 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 C16orf59Q7L2K0 433 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 OTOP3Q7RTS5 596 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 OVCH1Q7RTY7 1134 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 DDX53Q86TM3 631 aaKnown RBP7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 CABP7Q86V35 215 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 OSTM1Q86WC4 334 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 CHAC2Q8WUX2 184 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 WNK4Q96J92 1243 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 CELF4Q9BZC1 486 aaKnown RBP7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 MAPRE3Q9UPY8 281 aa7.01□□□□□ -1.29
HMGB3P19-201ENST00000403971 AMY2AP04746 511 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 GLI1P08151 1106 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 AMY2BP19961 511 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 PDE6BP35913 854 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 JAM2P57087 298 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 RAB3GAP1Q15042 981 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 HABP4Q5JVS0 413 aaKnown RBP7□□□□□ -1.29
HMGB3P19-201ENST00000403971 KRT26Q7Z3Y9 468 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 STRA8Q7Z7C7 330 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 PPM1KQ8N3J5 372 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 CAAP1Q9H8G2 361 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 COL4A3BPQ9Y5P4 624 aa7□□□□□ -1.29
HMGB3P19-201ENST00000403971 ZNF891A8MT65 544 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 F8W031 263 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 TRAF5O00463 557 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 SGSM2O43147 1006 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 ITGB5P18084 799 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 AMPD3Q01432 767 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 SPIRE1Q08AE8 756 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 CRY1Q16526 586 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 STEAP3Q658P3 488 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 FSTL4Q6MZW2 842 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 PAQR3Q6TCH7 311 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 RPTNQ6XPR3 784 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 ARHGAP36Q6ZRI8 547 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 NXPE1Q8N323 547 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 NETO2Q8NC67 525 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 SH3RF2Q8TEC5 729 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 LIN37Q96GY3 246 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 CD244Q9BZW8 370 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 BCAS3Q9H6U6 928 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 SMURF1Q9HCE7 757 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 SLC6A20Q9NP91 592 aa6.99□□□□□ -1.29
HMGB3P19-201ENST00000403971 ZNF503-AS2A6NEH8 195 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 CBX4O00257 560 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 BIN1O00499 593 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 SLC27A2O14975 620 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 GSTA4O15217 222 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 CYBBP04839 570 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 MPOP05164 745 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 SOX5P35711 763 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 MECP2P51608 486 aaKnown RBP6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 GPR19Q15760 415 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 CT47A1Q5JQC4 288 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 DCP2Q8IU60 420 aaKnown RBP6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 AHI1Q8N157 1196 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 FAM168AQ92567 244 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 SLC6A17Q9H1V8 727 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 PCDH12Q9NPG4 1184 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 KLHL14Q9P2G3 628 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 PALD1Q9ULE6 856 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 CARMIL2Q6F5E8 1435 aa6.98□□□□□ -1.29
HMGB3P19-201ENST00000403971 OR14I1A6ND48 311 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 MAN2B1O00754 1011 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 NPTXRO95502 500 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 LTFP02788 710 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 NCLP19338 710 aaKnown RBP6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 SLC6A11P48066 632 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 LACTBP83111 547 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 PRR5P85299 388 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 EMC4Q5J8M3 183 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms