RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 DYDC2Q96IM9 177 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 EEF1B2P24534 225 aaKnown RBP10.15□□□□□ -0.78
ATL3-201ENST00000398868 HNRNPH2P55795 449 aaKnown RBP10.15□□□□□ -0.78
ATL3-201ENST00000398868 C2orf54Q08AI8 447 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 ADAM9Q13443 819 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 PKP1Q13835 747 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 ACCSLQ4AC99 568 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 DSTYKQ6XUX3 929 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 IFT122Q9HBG6 1241 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 SLC38A10Q9HBR0 1119 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
ATL3-201ENST00000398868 ABCC10Q5T3U5 1492 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 IRX4P78413 519 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 MECOMQ03112 1051 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 MORC3Q14149 939 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 SPATS2Q86XZ4 545 aaKnown RBP10.15□□□□□ -0.79
ATL3-201ENST00000398868 PPP4R1Q8TF05 950 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 USP28Q96RU2 1077 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 ANAPC5Q9UJX4 755 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 TPCN1Q9ULQ1 816 aa10.15□□□□□ -0.79
ATL3-201ENST00000398868 A6NJR5 290 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 CCND2P30279 289 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 TRAPPC10P48553 1259 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 BFSP1Q12934 665 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ZNF589Q86UQ0 364 aaPredicted RBP10.14□□□□□ -0.79
ATL3-201ENST00000398868 LRRC8AQ8IWT6 810 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 HEXIM2Q96MH2 286 aaKnown RBP10.14□□□□□ -0.79
ATL3-201ENST00000398868 NRBP2Q9NSY0 501 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 MAP3K1Q13233 1512 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 KCNJ18B7U540 433 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 FBXW4P57775 412 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 GUCY2DQ02846 1103 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 KCNJ12Q14500 433 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 CYFIP1Q7L576 1253 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 MYOCDQ8IZQ8 938 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 MIS18BP1Q6P0N0 1132 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 NEK8Q86SG6 692 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 PPWD1Q96BP3 646 aaKnown RBP10.14□□□□□ -0.79
ATL3-201ENST00000398868 TRIM56Q9BRZ2 755 aaKnown RBP10.14□□□□□ -0.79
ATL3-201ENST00000398868 UNC13AQ9UPW8 1703 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 PSMC5P62195 406 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 JADE1Q6IE81 842 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ANGPTL8Q6UXH0 198 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 THNSL1Q8IYQ7 743 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 HIPK4Q8NE63 616 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
ATL3-201ENST00000398868 AFG1LQ8WV93 481 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 NCAPGQ9BPX3 1015 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ZWILCHQ9H900 591 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 IMPACTQ9P2X3 320 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 CTTNBP2Q8WZ74 1663 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 DENND3A2RUS2 1198 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 CUTAO60888 179 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 RNF8O76064 485 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ZNF445P59923 1031 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 SLC7A5Q01650 507 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 SLC44A5Q8NCS7 719 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 AIFM3Q96NN9 605 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 PALMDQ9NP74 551 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 TBK1Q9UHD2 729 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 PPP2R2CQ9Y2T4 447 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 TTLL1O95922 423 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 COPB2P35606 906 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 CCNA1P78396 465 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ATP6V1E2Q96A05 226 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ANKRD36BP1Q96IX9 119 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 TSC22D3Q99576 134 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 PUS7LQ9H0K6 701 aaKnown RBP10.14□□□□□ -0.79
ATL3-201ENST00000398868 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 ABCB11O95342 1321 aa10.14□□□□□ -0.79
ATL3-201ENST00000398868 SGSM2O43147 1006 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ARHGAP6O43182 974 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ACTN1P12814 892 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 AFAP1L2Q8N4X5 818 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 BHMTQ93088 406 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 CFAP36Q96G28 342 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ELP3Q9H9T3 547 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 HPS4Q9NQG7 708 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 SAMSN1Q9NSI8 373 aaKnown RBP10.13□□□□□ -0.79
ATL3-201ENST00000398868 CTSHP09668 335 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 SCG2P13521 617 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 PFKFB1P16118 471 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 SLCO1A2P46721 670 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 RASSF7Q02833 373 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 MTMR3Q13615 1198 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 SYCP2LQ5T4T6 812 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ZNF449Q6P9G9 518 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 ATP8A2Q9NTI2 1148 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 DNAJC6O75061 913 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 STAT1P42224 750 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 MYL7Q01449 175 aa10.13□□□□□ -0.79
ATL3-201ENST00000398868 NSUN2Q08J23 767 aaKnown RBP eCLIP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms