RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SETDB1Q15047 1291 aa15.56■□□□□ 0.08
PCDHGA11-201ENST00000398587 IGDCC4Q8TDY8 1250 aa15.56■□□□□ 0.08
PCDHGA11-201ENST00000398587 TMEM191BP0C7N4 346 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 DALRD3Q5D0E6 543 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 JPH2Q9BR39 696 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SPTLC3Q9NUV7 552 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 PABPN1LA6NDY0 278 aaKnown RBP15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 KIF28PB7ZC32 967 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 M0QZ92 97 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 NTSR2O95665 410 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 HOXA13P31271 388 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 MFAP3P55082 362 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 TAOK1Q7L7X3 1001 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 HACE1Q8IYU2 909 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 BHMT2Q9H2M3 363 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SEPT9Q9UHD8 586 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SOWAHDA6NJG2 315 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 CLIC2O15247 247 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SORBS3O60504 671 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 NDUFA10O95299 355 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 DDIT3P35638 169 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 MXRA7P84157 204 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 PTK2Q05397 1052 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 CEP170P1Q96L14 293 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 TMOD1P28289 359 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 UAP1Q16222 522 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SBK1Q52WX2 424 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SHC4Q6S5L8 630 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 ACRBPQ8NEB7 543 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 SSX2IPQ9Y2D8 614 aa15.55■□□□□ 0.08
PCDHGA11-201ENST00000398587 PVALEFA0A1B0GWK0 134 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 ECE2O60344 883 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 MFAP3LO75121 409 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 ALDH3A1P30838 453 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 RCSD1Q6JBY9 416 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 MB21D1Q8N884 522 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 KMT5AQ9NQR1 393 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 DAPK3O43293 454 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 STK10O94804 968 aaKnown RBP15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 CCDC97Q96F63 343 aaPredicted RBP15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 PLCB1Q9NQ66 1216 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 ENC1O14682 589 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 CALRP27797 417 aaKnown RBP15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 TAF12Q16514 161 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 DENND2CQ68D51 928 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 CRAMP1Q96RY5 1269 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 SMC6Q96SB8 1091 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 PCDHA6Q9UN73 950 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 PCDHA8Q9Y5H6 950 aa15.54■□□□□ 0.08
PCDHGA11-201ENST00000398587 POLR2BP30876 1174 aaKnown RBP15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 ABCD1P33897 745 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 NSFP46459 744 aaKnown RBP15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 SEMA3FQ13275 785 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 BARGINQ6ZT62 677 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 RNF34Q969K3 372 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 ATP2C1P98194 919 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 ALCAMQ13740 583 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 FAM20AQ96MK3 541 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 PLEKHA4Q9H4M7 779 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 MAP2P11137 1827 aaKnown RBP15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 CASP1P29466 404 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 EIF4A3P38919 411 aaKnown RBP15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 GUCY2FP51841 1108 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 CCNA1P78396 465 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 MIS12Q9H081 205 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 OSBPL5Q9H0X9 879 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 POTEMA6NI47 508 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L10C9JJH3 530 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 CCND2P30279 289 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 CA8P35219 290 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 ITPK1Q13572 414 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 PTPROQ16827 1216 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 FAM81BQ96LP2 452 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 ANKFY1Q9P2R3 1169 aa15.53■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L15C9J2P7 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L11C9JVI0 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L18D6R9N7 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L22D6RA61 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L19D6RCP7 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L20D6RJB6 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L24Q0WX57 530 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 TFDP1Q14186 410 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 CCDC6Q16204 474 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 USP17L6PQ6QN14 398 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 SPC25Q9HBM1 224 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 NCOA3Q9Y6Q9 1424 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 GUCY1A2P33402 732 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 CTNNA1P35221 906 aaKnown RBP15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 ARID5BQ14865 1188 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 MIS18BP1Q6P0N0 1132 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 SRBD1Q8N5C6 995 aaKnown RBP15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 TRIM7Q9C029 511 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 NHEJ1Q9H9Q4 299 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms