RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ORC2Q13416 577 aaPredicted RBP26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 LENG9Q96B70 501 aa26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 USP28Q96RU2 1077 aa26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 FTOQ9C0B1 505 aaKnown RBP eCLIP26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 TFIP11Q9UBB9 837 aaKnown RBP26.76■■□□□ 1.87
TSPAN4-203ENST00000397397 FIBPO43427 364 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 CEBPZQ03701 1054 aaKnown RBP26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 SF3A1Q15459 793 aaKnown RBP26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 ANO1Q5XXA6 986 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 TAPT1Q6NXT6 567 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 POTEDQ86YR6 584 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 CDHR1Q96JP9 859 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 PDGFCQ9NRA1 345 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 CLIC4Q9Y696 253 aa26.75■■□□□ 1.87
TSPAN4-203ENST00000397397 ICAM3P32942 547 aa26.74■■□□□ 1.87
TSPAN4-203ENST00000397397 SEMA3FQ13275 785 aa26.74■■□□□ 1.87
TSPAN4-203ENST00000397397 UIMC1Q96RL1 719 aa26.74■■□□□ 1.87
TSPAN4-203ENST00000397397 KCNH7Q9NS40 1196 aa26.74■■□□□ 1.87
TSPAN4-203ENST00000397397 NRBP1Q9UHY1 535 aa26.74■■□□□ 1.87
TSPAN4-203ENST00000397397 MRVI1Q9Y6F6 885 aa26.74■■□□□ 1.87
TSPAN4-203ENST00000397397 SPATA31C2B4DYI2 1134 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 MAFGO15525 162 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 ZNF865P0CJ78 1059 aaPredicted RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 CACNB2Q08289 660 aaPredicted RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 ATL3Q6DD88 541 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 SCFD2Q8WU76 684 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 CHAMP1Q96JM3 812 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 PKD2L1Q9P0L9 805 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 CEP131Q9UPN4 1083 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 RBM47A0AV96 593 aaKnown RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 MSH4O15457 936 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 MARCH6O60337 910 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 PRKAR2AP13861 404 aaKnown RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 NCLP19338 710 aaKnown RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 PTGDRQ13258 359 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 CALCRLQ16602 461 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 KCNV1Q6PIU1 500 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 TRPV1Q8NER1 839 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 TNPO1Q92973 898 aaKnown RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 TMEM60Q9H2L4 133 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 AGO4Q9HCK5 861 aaKnown RBP26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 CFAP45Q9UL16 551 aa26.73■■□□□ 1.87
TSPAN4-203ENST00000397397 BMP15O95972 392 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 INHAP05111 366 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 CYBAP13498 195 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 ADCYAP1R1P41586 468 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 KRT85P78386 507 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 TTLL4Q14679 1199 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 CCDC144BQ3MJ40 725 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 ZNF577Q9BSK1 485 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 POLR3EQ9NVU0 708 aa26.72■■□□□ 1.87
TSPAN4-203ENST00000397397 BAG4O95429 457 aaKnown RBP26.71■■□□□ 1.87
TSPAN4-203ENST00000397397 TGFB3P10600 412 aa26.71■■□□□ 1.87
TSPAN4-203ENST00000397397 C4orf32Q8N8J7 132 aa26.71■■□□□ 1.87
TSPAN4-203ENST00000397397 ETNPPLQ8TBG4 499 aa26.71■■□□□ 1.87
TSPAN4-203ENST00000397397 SH3TC2Q8TF17 1288 aa26.71■■□□□ 1.87
TSPAN4-203ENST00000397397 KCNMB3Q9NPA1 279 aa26.71■■□□□ 1.87
TSPAN4-203ENST00000397397 TCHHQ07283 1943 aa26.7■■□□□ 1.87
TSPAN4-203ENST00000397397 TBX3O15119 743 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 ATP9AO75110 1047 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 ARIH2O95376 493 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 OR52Z1P0C646 297 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 TXNP10599 105 aaKnown RBP26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 NASPP49321 788 aaPredicted RBP26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 STK38Q15208 465 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 LY6KQ17RY6 165 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 SLC9C1Q4G0N8 1177 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 IQSEC1Q6DN90 963 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 GJA10Q969M2 543 aa26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 DDX41Q9UJV9 622 aaKnown RBP26.7■■□□□ 1.86
TSPAN4-203ENST00000397397 IPO5O00410 1097 aaKnown RBP26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 CNGA1P29973 690 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 ATP2C1P98194 919 aaPredicted RBP26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 PTPAQ15257 358 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 MAP3K21Q5TCX8 1036 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 CCDC62Q6P9F0 684 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 SLFN12Q8IYM2 578 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 HAS1Q92839 578 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 SLC5A5Q92911 643 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 FAM20AQ96MK3 541 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 MTMR9Q96QG7 549 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 FAM184BQ9ULE4 1060 aa26.69■■□□□ 1.86
TSPAN4-203ENST00000397397 HTTP42858 3142 aa26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 LAD1O00515 517 aa26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 KCNA2P16389 499 aa26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 CCND3P30281 292 aaPredicted RBP26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 SP2Q02086 613 aa26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 TNFAIP2Q03169 654 aa26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 TMEM63BQ5T3F8 832 aa26.68■■□□□ 1.86
TSPAN4-203ENST00000397397 DOCK5Q9H7D0 1870 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 YEATS4O95619 227 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 AKR1A1P14550 325 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 SMPD1P17405 629 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 UBA1P22314 1058 aaKnown RBP26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 ITGB3BPQ13352 177 aaPredicted RBP26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 SLC39A14Q15043 492 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 LRCH2Q5VUJ6 765 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 LINC00301Q8NCQ3 95 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 SENP7Q9BQF6 1050 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms