RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 PIBF1Q8WXW3 757 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 WDR11Q9BZH6 1224 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 NKRFO15226 690 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP98-205ENST00000397007 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
NUP98-205ENST00000397007 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 BRAPQ7Z569 592 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 PCYT2Q99447 389 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 SLC5A4Q9NY91 659 aa12.1□□□□□ -0.47
NUP98-205ENST00000397007 MSH4O15457 936 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 ARP10275 920 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 UBA1P22314 1058 aaKnown RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 NLRP5P59047 1200 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 SETQ01105 290 aaPredicted RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 STXBP2Q15833 593 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 IVNS1ABPQ9Y6Y0 642 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 FIBPO43427 364 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 DUSP11O75319 330 aaKnown RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 TDP2O95551 362 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 PRPHP41219 470 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 NONOQ15233 471 aaKnown RBP eCLIP12.09□□□□□ -0.47
NUP98-205ENST00000397007 CCDC144BQ3MJ40 725 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 AFAP1L1Q8TED9 768 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 DDX20Q9UHI6 824 aaKnown RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 TRIP12Q14669 1992 aaPredicted RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 COL4A6Q14031 1691 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 GJA8P48165 433 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 ATP2C1P98194 919 aaPredicted RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
NUP98-205ENST00000397007 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 KCNH7Q9NS40 1196 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 IGSF9BQ9UPX0 1349 aa12.09□□□□□ -0.47
NUP98-205ENST00000397007 CCNE2O96020 404 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 ZSCAN22P10073 491 aaPredicted RBP12.08□□□□□ -0.48
NUP98-205ENST00000397007 PDCP20941 246 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 PTGS1P23219 599 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 ADAM17P78536 824 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 MTFR1Q15390 333 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 JAKMIP3Q5VZ66 844 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 IGSF22Q8N9C0 903 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 SH3TC2Q8TF17 1288 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 UNC93B1Q9H1C4 597 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 EMSYQ7Z589 1322 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 ARHGEF16Q5VV41 709 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 DPP9Q86TI2 863 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 SESTD1Q86VW0 696 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP98-205ENST00000397007 TMEM60Q9H2L4 133 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
NUP98-205ENST00000397007 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 F13A1P00488 732 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 HYIQ5T013 277 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
NUP98-205ENST00000397007 CCL5P13501 91 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 ADCYAP1R1P41586 468 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.487e-14■■□□□ 12.5
NUP98-205ENST00000397007 INF2Q27J81 1249 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 LARP1BQ659C4 914 aaKnown RBP12.07□□□□□ -0.48
NUP98-205ENST00000397007 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 KAT2BQ92831 832 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 RIT2Q99578 217 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 C16orf70Q9BSU1 422 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
NUP98-205ENST00000397007 GRIN2DO15399 1336 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 GSTTP1A0A1W2PQM5 241 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 GJB1P08034 283 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 AKR1A1P14550 325 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 XBP1P17861 261 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
NUP98-205ENST00000397007 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 PIK3AP1Q6ZUJ8 805 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 GPR20Q99678 358 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 TSEN34Q9BSV6 310 aaKnown RBP12.07□□□□□ -0.48
NUP98-205ENST00000397007 PDCD11Q14690 1871 aaKnown RBP12.07□□□□□ -0.48
NUP98-205ENST00000397007 ECM1Q16610 540 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 SCFD2Q8WU76 684 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 PCDHB6Q9Y5E3 794 aa12.07□□□□□ -0.48
NUP98-205ENST00000397007 SPDYE3A6NKU9 549 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 ZBTB42B2RXF5 422 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 RGS19P49795 217 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 NAP1L4Q99733 375 aaKnown RBP12.06□□□□□ -0.48
NUP98-205ENST00000397007 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
NUP98-205ENST00000397007 RAET1EQ8TD07 263 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 LRRC15Q8TF66 581 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 RTEL1Q9NZ71 1219 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 LAD1O00515 517 aa12.06□□□□□ -0.48
NUP98-205ENST00000397007 MSCO60682 206 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms