RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 SLC4A7Q9Y6M7 1214 aa20.86■□□□□ 0.93
CXCL12-204ENST00000395793 MCM5P33992 734 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 TRAF1Q13077 416 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 SEMA3FQ13275 785 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 HIC1Q14526 733 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 MFSD10Q14728 455 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 GPNMBQ14956 572 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 BMP2KLQ5H9B9 411 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 CMTR1Q8N1G2 835 aaKnown RBP20.85■□□□□ 0.93
CXCL12-204ENST00000395793 SRBD1Q8N5C6 995 aaKnown RBP20.85■□□□□ 0.93
CXCL12-204ENST00000395793 CTCFLQ8NI51 663 aaPredicted RBP20.85■□□□□ 0.93
CXCL12-204ENST00000395793 TMEM87BQ96K49 555 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 COL25A1Q9BXS0 654 aaPredicted RBP20.85■□□□□ 0.93
CXCL12-204ENST00000395793 LRRC2Q9BYS8 371 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 ANO2Q9NQ90 1003 aa20.85■□□□□ 0.93
CXCL12-204ENST00000395793 CHD7Q9P2D1 2997 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 RFC2P35250 354 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 BFSP2Q13515 415 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 ADGRE1Q14246 886 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 KIAA0753Q2KHM9 967 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 USP17L6PQ6QN14 398 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 WNT8BQ93098 351 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 SPATA33Q96N06 139 aa20.84■□□□□ 0.93
CXCL12-204ENST00000395793 ATP2A2P16615 1042 aaKnown RBP20.83■□□□□ 0.93
CXCL12-204ENST00000395793 SMARCA1P28370 1054 aa20.83■□□□□ 0.93
CXCL12-204ENST00000395793 ZNF200P98182 395 aaPredicted RBP20.83■□□□□ 0.93
CXCL12-204ENST00000395793 RBL2Q08999 1139 aa20.83■□□□□ 0.93
CXCL12-204ENST00000395793 KCNV1Q6PIU1 500 aa20.83■□□□□ 0.93
CXCL12-204ENST00000395793 NFXL1Q6ZNB6 911 aa20.83■□□□□ 0.93
CXCL12-204ENST00000395793 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
CXCL12-204ENST00000395793 CAGE1Q8TC20 777 aa20.83■□□□□ 0.93
CXCL12-204ENST00000395793 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
CXCL12-204ENST00000395793 INPP4AQ96PE3 977 aaPredicted RBP20.83■□□□□ 0.93
CXCL12-204ENST00000395793 CCDC69A6NI79 296 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 MEIS2O14770 477 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 TGFB3P10600 412 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 KIF5BP33176 963 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 LIFRP42702 1097 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 TCTN1Q2MV58 587 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 TRIM71Q2Q1W2 868 aaKnown RBP20.82■□□□□ 0.92
CXCL12-204ENST00000395793 C7orf31Q8N865 590 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 AFAP1L1Q8TED9 768 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 C16orf70Q9BSU1 422 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 KATNAL1Q9BW62 490 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 TELO2Q9Y4R8 837 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 PCDHA11Q9Y5I1 949 aa20.82■□□□□ 0.92
CXCL12-204ENST00000395793 hCG_1642624A0A1W2PR95 340 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 PPFIA4O75335 1185 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 ICAM3P32942 547 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 TRAF7Q6Q0C0 670 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 LRRC8DQ7L1W4 858 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 LZTS2Q9BRK4 669 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 FTOQ9C0B1 505 aaKnown RBP eCLIP20.81■□□□□ 0.92
CXCL12-204ENST00000395793 SLC28A3Q9HAS3 691 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 RTEL1Q9NZ71 1219 aa20.81■□□□□ 0.92
CXCL12-204ENST00000395793 ARHGEF15O94989 841 aa20.8■□□□□ 0.92
CXCL12-204ENST00000395793 CKBP12277 381 aa20.8■□□□□ 0.92
CXCL12-204ENST00000395793 SELPP16109 830 aa20.8■□□□□ 0.92
CXCL12-204ENST00000395793 TMTC2Q8N394 836 aa20.8■□□□□ 0.92
CXCL12-204ENST00000395793 CCDC155Q8N6L0 562 aa20.8■□□□□ 0.92
CXCL12-204ENST00000395793 GAS2L1Q99501 681 aaPredicted RBP20.8■□□□□ 0.92
CXCL12-204ENST00000395793 PRDM6Q9NQX0 595 aa20.8■□□□□ 0.92
CXCL12-204ENST00000395793 SPATA31C2B4DYI2 1134 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 PIK3CDO00329 1044 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 NBNO60934 754 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 ACTN1P12814 892 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 GNAQP50148 359 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 PTK7Q13308 1070 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 PPP2R2DQ66LE6 453 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 TMTC3Q6ZXV5 915 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 SGMS1Q86VZ5 419 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 MICU3Q86XE3 530 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 RASEFQ8IZ41 740 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 SMARCC2Q8TAQ2 1214 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 TCEANC2Q96MN5 208 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 MLXIPQ9HAP2 919 aa20.79■□□□□ 0.92
CXCL12-204ENST00000395793 SEC63Q9UGP8 760 aaKnown RBP20.79■□□□□ 0.92
CXCL12-204ENST00000395793 FIBPO43427 364 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 STAM2O75886 525 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 LGALS2P05162 132 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 MBTPS1Q14703 1052 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 ADCK5Q3MIX3 580 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 GNPTABQ3T906 1256 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 PCNX4Q63HM2 1172 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 CYFIP1Q7L576 1253 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 CCDC82Q8N4S0 544 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 SLC9A7Q96T83 725 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 SLC12A7Q9Y666 1083 aa20.78■□□□□ 0.92
CXCL12-204ENST00000395793 COL4A4P53420 1690 aaPredicted RBP20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CXCL10P02778 98 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CA3P07451 260 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CALM1P0DP23 149 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CALM2P0DP24 149 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 CALM3P0DP25 149 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 HOXC8P31273 242 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 UBE2SQ16763 222 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 ZNF618Q5T7W0 954 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 METTL7BQ6UX53 244 aa20.77■□□□□ 0.92
CXCL12-204ENST00000395793 TMCO2Q7Z6W1 182 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms