RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 GOLGA6BA6NDN3 693 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 RBAK-RBAKDNI3L0D1 243 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 RFC4P35249 363 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 PPP1R18Q6NYC8 613 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 HINFPQ9BQA5 517 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 TLR10Q9BXR5 811 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 COL4A3BPQ9Y5P4 624 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 MYH7BA7E2Y1 1941 aa20.85■□□□□ 0.93
CBX1-202ENST00000393408 IGKV6D-41A0A0C4DH26 115 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 NCK2O43639 380 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 CXCR5P32302 372 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 SLC1A4P43007 532 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 FKBP3Q00688 224 aaKnown RBP20.84■□□□□ 0.93
CBX1-202ENST00000393408 SEPT2Q15019 361 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 SND1Q7KZF4 910 aaKnown RBP eCLIP20.84■□□□□ 0.93
CBX1-202ENST00000393408 ANKRD13CQ8N6S4 541 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 HAS1Q92839 578 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 PSMB7Q99436 277 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 TANGO6Q9C0B7 1094 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 GPCPD1Q9NPB8 672 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 SMARCAL1Q9NZC9 954 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 GGA1Q9UJY5 639 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 TRIM66O15016 1216 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 CLK2P49760 499 aaKnown RBP20.84■□□□□ 0.93
CBX1-202ENST00000393408 RASSF7Q02833 373 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 GABPAQ06546 454 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 UBE2SQ16763 222 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 KLHDC7AQ5VTJ3 777 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 HAUS3Q68CZ6 603 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.84■□□□□ 0.93
CBX1-202ENST00000393408 RNF10Q8N5U6 811 aaKnown RBP20.84■□□□□ 0.93
CBX1-202ENST00000393408 RPGRQ92834 1020 aaKnown RBP20.84■□□□□ 0.93
CBX1-202ENST00000393408 JMJD4Q9H9V9 463 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 EHD2Q9NZN4 543 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 CEP72Q9P209 647 aa20.84■□□□□ 0.93
CBX1-202ENST00000393408 PNMA6FA0A0J9YX94 578 aa20.83■□□□□ 0.93
CBX1-202ENST00000393408 PPP1R11O60927 126 aaPredicted RBP20.83■□□□□ 0.93
CBX1-202ENST00000393408 NOL4O94818 638 aa20.83■□□□□ 0.93
CBX1-202ENST00000393408 AKR1B1P15121 316 aa20.83■□□□□ 0.93
CBX1-202ENST00000393408 CCDC181Q5TID7 509 aa20.83■□□□□ 0.93
CBX1-202ENST00000393408 NOX5Q96PH1 765 aa20.83■□□□□ 0.93
CBX1-202ENST00000393408 DDX25Q9UHL0 483 aaKnown RBP20.83■□□□□ 0.93
CBX1-202ENST00000393408 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.92
CBX1-202ENST00000393408 MATR3P43243 847 aaKnown RBP eCLIP20.83■□□□□ 0.92
CBX1-202ENST00000393408 SYN2Q92777 582 aaPredicted RBP20.83■□□□□ 0.92
CBX1-202ENST00000393408 RASSF4Q9H2L5 321 aa20.83■□□□□ 0.92
CBX1-202ENST00000393408 TLR2O60603 784 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 SHOX2O60902 331 aaPredicted RBP20.82■□□□□ 0.92
CBX1-202ENST00000393408 SLC7A5Q01650 507 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 FAM26FQ5R3K3 315 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 TRAPPC3LQ5T215 181 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 PRR5LQ6MZQ0 368 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 CLEC10AQ8IUN9 316 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 C10orf67Q8IYJ2 551 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 TBC1D22AQ8WUA7 517 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 NUCKS1Q9H1E3 243 aaKnown RBP20.82■□□□□ 0.92
CBX1-202ENST00000393408 NLRC4Q9NPP4 1024 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 PANK4Q9NVE7 773 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 STIM2Q9P246 746 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 ATAD5Q96QE3 1844 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 TRAF5O00463 557 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 PPFIA4O75335 1185 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 PAFAH1B1P43034 410 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 EIF6P56537 245 aaKnown RBP20.82■□□□□ 0.92
CBX1-202ENST00000393408 MRPS25P82663 173 aaKnown RBP20.82■□□□□ 0.92
CBX1-202ENST00000393408 ZNF543Q08ER8 600 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 SLC9C1Q4G0N8 1177 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 CCDC40Q4G0X9 1142 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 TDRD12Q587J7 1177 aaKnown RBP20.82■□□□□ 0.92
CBX1-202ENST00000393408 DPP8Q6V1X1 898 aaPredicted RBP20.82■□□□□ 0.92
CBX1-202ENST00000393408 ADGRF4Q8IZF3 695 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 FAM76AQ8TAV0 307 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 DAGLAQ9Y4D2 1042 aa20.82■□□□□ 0.92
CBX1-202ENST00000393408 LY75O60449 1722 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 BUB1O43683 1085 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 SERPING1P05155 500 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 TNFRSF8P28908 595 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 EPHB4P54760 987 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 HYIQ5T013 277 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 FAM83BQ5T0W9 1011 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 SFMBT2Q5VUG0 894 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 GJA10Q969M2 543 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 ZFP91Q96JP5 570 aaPredicted RBP20.81■□□□□ 0.92
CBX1-202ENST00000393408 CEP63Q96MT8 703 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 FGFBP2Q9BYJ0 223 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 TSKSQ9UJT2 592 aa20.81■□□□□ 0.92
CBX1-202ENST00000393408 GOLGA6CA6NDK9 693 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 GOLGA6DP0CG33 693 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 VPS72Q15906 364 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 CRY2Q49AN0 593 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 CERKQ8TCT0 537 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 SH3GL2Q99962 352 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 RBM12Q9NTZ6 932 aaKnown RBP20.8■□□□□ 0.92
CBX1-202ENST00000393408 GOLGA6AQ9NYA3 693 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 RSPH14Q9UHP6 348 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 EMBQ6PCB8 327 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 CUL5Q93034 780 aa20.8■□□□□ 0.92
CBX1-202ENST00000393408 LSM14BQ9BX40 385 aaKnown RBP20.8■□□□□ 0.92
CBX1-202ENST00000393408 PCDHA2Q9Y5H9 948 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms