RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 AFAP1L1Q8TED9 768 aa12.39□□□□□ -0.43
TRAV4-201ENST00000390426 SLC9A7Q96T83 725 aa12.39□□□□□ -0.43
TRAV4-201ENST00000390426 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
TRAV4-201ENST00000390426 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
TRAV4-201ENST00000390426 GTF2IRD1Q9UHL9 959 aa12.39□□□□□ -0.43
TRAV4-201ENST00000390426 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
TRAV4-201ENST00000390426 A0A0C4DFX4 3053 aa12.39□□□□□ -0.43
TRAV4-201ENST00000390426 PPFIA4O75335 1185 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 F2P00734 622 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 CKBP12277 381 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 PTK7Q13308 1070 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 HIC1Q14526 733 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 TJAP1Q5JTD0 557 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 MICALL1Q8N3F8 863 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 SYMPKQ92797 1274 aaKnown RBP12.38□□□□□ -0.43
TRAV4-201ENST00000390426 BCAS3Q9H6U6 928 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 LY9Q9HBG7 655 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 KIAA1217Q5T5P2 1943 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 GBF1Q92538 1859 aa12.38□□□□□ -0.43
TRAV4-201ENST00000390426 PRC1O43663 620 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 NBNO60934 754 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 TGFB3P10600 412 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 HOXD8P13378 290 aaPredicted RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 KCNJ6P48051 423 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 RBL2Q08999 1139 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 TCTN1Q2MV58 587 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 TRIM71Q2Q1W2 868 aaKnown RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 WNT8BQ93098 351 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
TRAV4-201ENST00000390426 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
TRAV4-201ENST00000390426 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 KIF28PB7ZC32 967 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 SLC27A2O14975 620 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 DDAH1O94760 285 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 BAIAP3O94812 1187 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 PLEKHA8P1O95397 391 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 RXRAP19793 462 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 KIF5BP33176 963 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 WDR5P61964 334 aaKnown RBP12.36□□□□□ -0.43
TRAV4-201ENST00000390426 MRPS9P82933 396 aaKnown RBP12.36□□□□□ -0.43
TRAV4-201ENST00000390426 TAP1Q03518 808 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 ZNF618Q5T7W0 954 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 RAB11FIP4Q86YS3 637 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 CMTR1Q8N1G2 835 aaKnown RBP12.36□□□□□ -0.43
TRAV4-201ENST00000390426 SRBD1Q8N5C6 995 aaKnown RBP12.36□□□□□ -0.43
TRAV4-201ENST00000390426 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 ARNTL2Q8WYA1 636 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 MAP3K14Q99558 947 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 SPZ1Q9BXG8 430 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
TRAV4-201ENST00000390426 C17orf102A2RUQ5 167 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 CCDC69A6NI79 296 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
TRAV4-201ENST00000390426 TLL1O43897 1013 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
TRAV4-201ENST00000390426 CXCL10P02778 98 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 MCM5P33992 734 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 GNAQP50148 359 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 DEFB103AP81534 67 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 TRAF7Q6Q0C0 670 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
TRAV4-201ENST00000390426 CUL5Q93034 780 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
TRAV4-201ENST00000390426 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
TRAV4-201ENST00000390426 TRIP12Q14669 1992 aaPredicted RBP12.35□□□□□ -0.43
TRAV4-201ENST00000390426 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 FRMPD4Q14CM0 1322 aa12.35□□□□□ -0.43
TRAV4-201ENST00000390426 TTC28Q96AY4 2481 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 hCG_1642624A0A1W2PR95 340 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 SPATA31C2B4DYI2 1134 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 H3BRB1 525 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
TRAV4-201ENST00000390426 STAM2O75886 525 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 LGALS2P05162 132 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 ICAM3P32942 547 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 THPOP40225 353 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
TRAV4-201ENST00000390426 SP4Q02446 784 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 NEDD9Q14511 834 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms