RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 VSIG10LQ86VR7 867 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 HERC6Q8IVU3 1022 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 MB21D2Q8IYB1 491 aaPredicted RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 PPTC7Q8NI37 304 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
TRAV3-201ENST00000390425 NLRC5Q86WI3 1866 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 FRMPD4Q14CM0 1322 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
TRAV3-201ENST00000390425 NBNO60934 754 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 BAIAP3O94812 1187 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 CXCL10P02778 98 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 CKBP12277 381 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 SELPP16109 830 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 WDR5P61964 334 aaKnown RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 TAP1Q03518 808 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 TRDNQ13061 729 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 LAMC2Q13753 1193 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 MBTPS1Q14703 1052 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 TMCO2Q7Z6W1 182 aaPredicted RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 PHOSPHO2Q8TCD6 241 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 ATXN2LQ8WWM7 1075 aaKnown RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 FTOQ9C0B1 505 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 BCAS3Q9H6U6 928 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 CERS4Q9HA82 394 aa12.81□□□□□ -0.36
TRAV3-201ENST00000390425 MAP3K20Q9NYL2 800 aaKnown RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
TRAV3-201ENST00000390425 LCHNA4D1U4 455 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 GGPS1O95749 300 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 DEFB103AP81534 67 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
TRAV3-201ENST00000390425 ZNF200P98182 395 aaPredicted RBP12.8□□□□□ -0.36
TRAV3-201ENST00000390425 WTAPQ15007 396 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 CELF3Q5SZQ8 465 aaKnown RBP12.8□□□□□ -0.36
TRAV3-201ENST00000390425 KRT40Q6A162 431 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 RALYLQ86SE5 291 aaKnown RBP12.8□□□□□ -0.36
TRAV3-201ENST00000390425 MICALL1Q8N3F8 863 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 CCDC155Q8N6L0 562 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 NCOA7Q8NI08 942 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 RUFY2Q8WXA3 655 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 ASB2Q96Q27 587 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 KATNAL1Q9BW62 490 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 MTCH2Q9Y6C9 303 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 LOXHD1Q8IVV2 1947 aa12.8□□□□□ -0.36
TRAV3-201ENST00000390425 PNMA6FA0A0J9YX94 578 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
TRAV3-201ENST00000390425 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 POU3F3P20264 500 aaPredicted RBP12.79□□□□□ -0.36
TRAV3-201ENST00000390425 CCND2P30279 289 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 SEMA3FQ13275 785 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 FCHSD1Q86WN1 690 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 SAMD3Q8N6K7 520 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 C16orf70Q9BSU1 422 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 MYL10Q9BUA6 226 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 TELO2Q9Y4R8 837 aa12.79□□□□□ -0.36
TRAV3-201ENST00000390425 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
TRAV3-201ENST00000390425 MYO7AQ13402 2215 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 ERICH2A1L162 156 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 LPXNO60711 386 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 PPFIA4O75335 1185 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 HOXC8P31273 242 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 PTK7Q13308 1070 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
TRAV3-201ENST00000390425 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 KCNV1Q6PIU1 500 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 ZNF654Q8IZM8 581 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 PIBF1Q8WXW3 757 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 ARNTL2Q8WYA1 636 aa12.78□□□□□ -0.36
TRAV3-201ENST00000390425 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 TNFRSF10AO00220 468 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 TLL1O43897 1013 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 LGALS2P05162 132 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 TGFB3P10600 412 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 ICAM3P32942 547 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 KCNJ6P48051 423 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.37
TRAV3-201ENST00000390425 TFF2Q03403 129 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 SART3Q15020 963 aaKnown RBP12.77□□□□□ -0.37
TRAV3-201ENST00000390425 SERINC5Q86VE9 423 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 INPP4AQ96PE3 977 aaPredicted RBP12.77□□□□□ -0.37
TRAV3-201ENST00000390425 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.37
TRAV3-201ENST00000390425 DDAH1O94760 285 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 GJB5O95377 273 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 PLEKHA8P1O95397 391 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 PARNO95453 639 aaKnown RBP12.76□□□□□ -0.37
TRAV3-201ENST00000390425 TRAF1Q13077 416 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 GRB10Q13322 594 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
TRAV3-201ENST00000390425 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms