RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 TGFB3P10600 412 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 HOXD8P13378 290 aaPredicted RBP27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 MFSD10Q14728 455 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 GNPTABQ3T906 1256 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 SESTD1Q86VW0 696 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 RPUSD2Q8IZ73 545 aaKnown RBP27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 INPP4AQ96PE3 977 aaPredicted RBP27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 CTAGE1Q96RT6 745 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 ALG1Q9BT22 464 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 KATNAL1Q9BW62 490 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 RTEL1Q9NZ71 1219 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 BRPF3Q9ULD4 1205 aa27.42■■□□□ 1.98
CDKN2A-203ENST00000380151 CNTNAP5Q8WYK1 1306 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 MYH7BA7E2Y1 1941 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 PBX2P40425 430 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 HEATR3Q7Z4Q2 680 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 DEFB128Q7Z7B8 93 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 PBX4Q9BYU1 374 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 PSTPIP2Q9H939 334 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 MLXIPQ9HAP2 919 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 HDAC6Q9UBN7 1215 aa27.41■■□□□ 1.98
CDKN2A-203ENST00000380151 TANC1Q9C0D5 1861 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 PITPNM1O00562 1244 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 ZBTB43O43298 467 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 STAM2O75886 525 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 SEMA3FQ13275 785 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 BFSP2Q13515 415 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 RTN1Q16799 776 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 KIAA0753Q2KHM9 967 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 C7orf31Q8N865 590 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 SLC17A8Q8NDX2 589 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 TIFAQ96CG3 184 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 BCAS3Q9H6U6 928 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 GTF2IRD1Q9UHL9 959 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 SCN5AQ14524 2016 aa27.4■■□□□ 1.98
CDKN2A-203ENST00000380151 HAS3O00219 553 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 NEFLP07196 543 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 CPA1P15085 419 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 UBE2SQ16763 222 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 PCNX4Q63HM2 1172 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 RETREG2Q8NC44 543 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 MYLIPQ8WY64 445 aa27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 RBM28Q9NW13 759 aaKnown RBP27.39■■□□□ 1.98
CDKN2A-203ENST00000380151 KLF18A0A0U1RQI7 1052 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 GOLGA8AA7E2F4 631 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 GOLGA8BA8MQT2 603 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 ZBBXA8MT70 800 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 FIBPO43427 364 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 PPFIA4O75335 1185 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 PFKMP08237 780 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 ICAM3P32942 547 aa27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 DHX38Q92620 1227 aaKnown RBP27.38■■□□□ 1.97
CDKN2A-203ENST00000380151 SPATA31C2B4DYI2 1134 aa27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 HMGB1P09429 215 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 IQCF3P0C7M6 154 aa27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 CCDC155Q8N6L0 562 aa27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 KCNB2Q92953 911 aa27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 JAKMIP1Q96N16 626 aaKnown RBP27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 NAP1L2Q9ULW6 460 aaPredicted RBP27.37■■□□□ 1.97
CDKN2A-203ENST00000380151 NOP56O00567 594 aaKnown RBP27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 HSPA4P34932 840 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 RFC2P35250 354 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 FGD1P98174 961 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 FUT2Q10981 343 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 WWC2Q6AWC2 1192 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 XRRA1Q6P2D8 792 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 CYFIP1Q7L576 1253 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 CAGE1Q8TC20 777 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 C16orf70Q9BSU1 422 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 ZNF576Q9H609 170 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 SNX14Q9Y5W7 946 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 SLC4A7Q9Y6M7 1214 aa27.36■■□□□ 1.97
CDKN2A-203ENST00000380151 NEDD9Q14511 834 aa27.35■■□□□ 1.97
CDKN2A-203ENST00000380151 GRIN2CQ14957 1233 aa27.35■■□□□ 1.97
CDKN2A-203ENST00000380151 METTL7BQ6UX53 244 aa27.35■■□□□ 1.97
CDKN2A-203ENST00000380151 LGALS2P05162 132 aa27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 FOSL2P15408 326 aa27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 ZNF200P98182 395 aaPredicted RBP27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 RAB30Q15771 203 aa27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 TYW1BQ6NUM6 668 aa27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 AFAP1L1Q8TED9 768 aa27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 FAM217BQ9NTX9 383 aaPredicted RBP27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 DOCK5Q9H7D0 1870 aa27.34■■□□□ 1.97
CDKN2A-203ENST00000380151 SPDYE3A6NKU9 549 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 CDC27P30260 824 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 NAPAP54920 295 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 SP4Q02446 784 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 NLRX1Q86UT6 975 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 FTOQ9C0B1 505 aaKnown RBP eCLIP27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 MSRAQ9UJ68 235 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 TELO2Q9Y4R8 837 aa27.33■■□□□ 1.97
CDKN2A-203ENST00000380151 REC8O95072 547 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 ACTN1P12814 892 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 SELPP16109 830 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 RABGGTBP53611 331 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 APOBRQ0VD83 1088 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 HIC1Q14526 733 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 BLOC1S2Q6QNY1 142 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 Q6ZUG5 572 aa27.32■■□□□ 1.96
CDKN2A-203ENST00000380151 LRRC8DQ7L1W4 858 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms