RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 SF3A1Q15459 793 aaKnown RBP27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 Q4G0T1 1027 aa27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 NIPA1Q7RTP0 329 aa27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 NLRX1Q86UT6 975 aa27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 SLAIN1Q8ND83 568 aa27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 PXYLP1Q8TE99 480 aa27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 GPRASP2Q96D09 838 aa27.72■■■□□ 2.03
TM6SF1-204ENST00000379390 NCLP19338 710 aaKnown RBP27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 GRK4P32298 578 aa27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 SETQ01105 290 aaPredicted RBP27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 ANO1Q5XXA6 986 aa27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 TAPT1Q6NXT6 567 aa27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 TNPO1Q92973 898 aaKnown RBP27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 GJA10Q969M2 543 aa27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 TMEM60Q9H2L4 133 aa27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 MRVI1Q9Y6F6 885 aa27.71■■■□□ 2.03
TM6SF1-204ENST00000379390 FIBPO43427 364 aa27.7■■■□□ 2.03
TM6SF1-204ENST00000379390 MSH4O15457 936 aa27.7■■■□□ 2.02
TM6SF1-204ENST00000379390 PRKAR2AP13861 404 aaKnown RBP27.7■■■□□ 2.02
TM6SF1-204ENST00000379390 CACNB2Q08289 660 aaPredicted RBP27.7■■■□□ 2.02
TM6SF1-204ENST00000379390 PTGDRQ13258 359 aa27.7■■■□□ 2.02
TM6SF1-204ENST00000379390 TRPV1Q8NER1 839 aa27.7■■■□□ 2.02
TM6SF1-204ENST00000379390 SH3TC2Q8TF17 1288 aa27.7■■■□□ 2.02
TM6SF1-204ENST00000379390 WDR81Q562E7 1941 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 ARIH2O95376 493 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 ZNF865P0CJ78 1059 aaPredicted RBP27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 CYBAP13498 195 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 ADCYAP1R1P41586 468 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 ORC2Q13416 577 aaPredicted RBP27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 CALCRLQ16602 461 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 CCDC144BQ3MJ40 725 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 ETNPPLQ8TBG4 499 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 SCFD2Q8WU76 684 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 POLR3EQ9NVU0 708 aa27.69■■■□□ 2.02
TM6SF1-204ENST00000379390 FRMPD3Q5JV73 1810 aa27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 SPATA31C2B4DYI2 1134 aa27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 INHAP05111 366 aa27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 TMEM63BQ5T3F8 832 aa27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 ZNF577Q9BSK1 485 aa27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 AGO4Q9HCK5 861 aaKnown RBP27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 KCNMB3Q9NPA1 279 aa27.68■■■□□ 2.02
TM6SF1-204ENST00000379390 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 ATP9AO75110 1047 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 PTGS1P23219 599 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 ICAM3P32942 547 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 KRT85P78386 507 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 C4orf32Q8N8J7 132 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 HAS1Q92839 578 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 CDHR1Q96JP9 859 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 IPO5O00410 1097 aaKnown RBP27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 SORBS3O60504 671 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 OR52Z1P0C646 297 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 NASPP49321 788 aaPredicted RBP27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 SP2Q02086 613 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 PTPAQ15257 358 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 LY6KQ17RY6 165 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 CEP131Q9UPN4 1083 aa27.67■■■□□ 2.02
TM6SF1-204ENST00000379390 ADCY6O43306 1168 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 TXNP10599 105 aaKnown RBP27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 UBA1P22314 1058 aaKnown RBP27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 ATP2C1P98194 919 aaPredicted RBP27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 ITGB3BPQ13352 177 aaPredicted RBP27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 TTLL4Q14679 1199 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 SLC9C1Q4G0N8 1177 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 GJC2Q5T442 439 aaPredicted RBP27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 ATL3Q6DD88 541 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 CCDC62Q6P9F0 684 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 BCAS3Q9H6U6 928 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 PRDM10Q9NQV6 1147 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 CFAP45Q9UL16 551 aa27.66■■■□□ 2.02
TM6SF1-204ENST00000379390 RBM47A0AV96 593 aaKnown RBP27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 MAFGO15525 162 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 MARCH6O60337 910 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 KCNA2P16389 499 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 CNGA1P29973 690 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 CCND3P30281 292 aaPredicted RBP27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 STK38Q15208 465 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 MAP3K21Q5TCX8 1036 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 FBXO46Q6PJ61 603 aaPredicted RBP27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 LENG1Q96BZ8 264 aaPredicted RBP27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 MTMR9Q96QG7 549 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 NRBP1Q9UHY1 535 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 BRCA2P51587 3418 aa27.65■■■□□ 2.02
TM6SF1-204ENST00000379390 BMP15O95972 392 aa27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 TGFB3P10600 412 aa27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 LINC00301Q8NCQ3 95 aa27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 COPS5Q92905 334 aa27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 SLC5A5Q92911 643 aa27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 GDPD2Q9HCC8 539 aa27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 DDX41Q9UJV9 622 aaKnown RBP27.64■■■□□ 2.02
TM6SF1-204ENST00000379390 DDX39AO00148 427 aaKnown RBP27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 TBX3O15119 743 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 MARCKSP29966 332 aaPredicted RBP27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 TXKP42681 527 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 LRCH2Q5VUJ6 765 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 KCNV1Q6PIU1 500 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 YEATS4O95619 227 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 SMPD1P17405 629 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 TNFAIP2Q03169 654 aa27.63■■■□□ 2.01
TM6SF1-204ENST00000379390 SLC39A14Q15043 492 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms