RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NONOQ15233 471 aaKnown RBP eCLIP21.36■■□□□ 1.019e-7■■■■□ 22.3
SSU72-203ENST00000378725 CCSAPQ6IQ19 270 aaPredicted RBP21.36■■□□□ 1.01
SSU72-203ENST00000378725 UBE2Q1Q7Z7E8 422 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 TLK2Q86UE8 772 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 DIS3L2Q8IYB7 885 aaKnown RBP21.36■■□□□ 1.01
SSU72-203ENST00000378725 CYP2W1Q8TAV3 490 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 COPS5Q92905 334 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 CDHR1Q96JP9 859 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 SPC25Q9HBM1 224 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 CCDC194A0A1B0GVG4 234 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 FAM86B1E9PN63 330 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 DNM1LO00429 736 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 FAM86B2P0C5J1 330 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 NR5A1Q13285 461 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 SAFBQ15424 915 aaKnown RBP eCLIP21.35■■□□□ 1.01
SSU72-203ENST00000378725 EARS2Q5JPH6 523 aaKnown RBP21.35■■□□□ 1.01
SSU72-203ENST00000378725 RNF180Q86T96 592 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 EMID1Q96A84 441 aaPredicted RBP21.35■■□□□ 1.01
SSU72-203ENST00000378725 SENP7Q9BQF6 1050 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 TSEN34Q9BSV6 310 aaKnown RBP21.35■■□□□ 1.01
SSU72-203ENST00000378725 AP5M1Q9H0R1 490 aa21.35■■□□□ 1.01
SSU72-203ENST00000378725 IGLV3-22A0A075B6J6 115 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 MYADML2A6NDP7 307 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 GH1P01241 217 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 ZNF76P36508 570 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
SSU72-203ENST00000378725 ARHGAP1Q07960 439 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 MTMR1Q13613 665 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 CELF3Q5SZQ8 465 aaKnown RBP21.34■■□□□ 1.01
SSU72-203ENST00000378725 PIK3AP1Q6ZUJ8 805 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 OR6J1Q8NGC5 347 aa21.34■■□□□ 1.01
SSU72-203ENST00000378725 FOXP1Q9H334 677 aaPredicted RBP21.34■■□□□ 1.01
SSU72-203ENST00000378725 CYP3A7-CYP3A51PA0A087WV96 503 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 C6orf222P0C671 652 aaPredicted RBP21.33■■□□□ 1.01
SSU72-203ENST00000378725 UBA1P22314 1058 aaKnown RBP21.33■■□□□ 1.01
SSU72-203ENST00000378725 CYP3A7P24462 503 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 RGS19P49795 217 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 LAMC2Q13753 1193 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 NEDD9Q14511 834 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 INF2Q27J81 1249 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 MYSM1Q5VVJ2 828 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 KCNH7Q9NS40 1196 aa21.33■■□□□ 1.01
SSU72-203ENST00000378725 KIAA1217Q5T5P2 1943 aa21.32■■□□□ 1
SSU72-203ENST00000378725 A6NJR5 290 aa21.32■■□□□ 1
SSU72-203ENST00000378725 ATP9AO75110 1047 aa21.32■■□□□ 1
SSU72-203ENST00000378725 FARP2O94887 1054 aaPredicted RBP21.32■■□□□ 1
SSU72-203ENST00000378725 ARP10275 920 aa21.32■■□□□ 1
SSU72-203ENST00000378725 COL6A1P12109 1028 aa21.32■■□□□ 1
SSU72-203ENST00000378725 KCNA2P16389 499 aa21.32■■□□□ 1
SSU72-203ENST00000378725 KCNA10Q16322 511 aa21.32■■□□□ 1
SSU72-203ENST00000378725 FSCN1Q16658 493 aaKnown RBP21.32■■□□□ 1
SSU72-203ENST00000378725 GNASQ5JWF2 1037 aa21.32■■□□□ 1
SSU72-203ENST00000378725 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
SSU72-203ENST00000378725 MOXD1Q6UVY6 613 aa21.32■■□□□ 1
SSU72-203ENST00000378725 PLA2G4DQ86XP0 818 aa21.32■■□□□ 1
SSU72-203ENST00000378725 DHX37Q8IY37 1157 aaKnown RBP21.32■■□□□ 1
SSU72-203ENST00000378725 PCSK9Q8NBP7 692 aaKnown RBP21.32■■□□□ 1
SSU72-203ENST00000378725 MBOAT7Q96N66 472 aa21.32■■□□□ 1
SSU72-203ENST00000378725 PHF24Q9UPV7 400 aa21.32■■□□□ 1
SSU72-203ENST00000378725 KBTBD13C9JR72 458 aa21.31■■□□□ 1
SSU72-203ENST00000378725 GGPS1O95749 300 aa21.31■■□□□ 1
SSU72-203ENST00000378725 U2AF2P26368 475 aaKnown RBP eCLIP21.31■■□□□ 17e-8■■□□□ 13
SSU72-203ENST00000378725 BEX3Q00994 111 aa21.31■■□□□ 1
SSU72-203ENST00000378725 NEK8Q86SG6 692 aa21.31■■□□□ 1
SSU72-203ENST00000378725 GIMAP8Q8ND71 665 aaPredicted RBP21.31■■□□□ 1
SSU72-203ENST00000378725 DIS3LQ8TF46 1054 aaKnown RBP21.31■■□□□ 1
SSU72-203ENST00000378725 LENG9Q96B70 501 aa21.31■■□□□ 1
SSU72-203ENST00000378725 PAWRQ96IZ0 340 aaKnown RBP21.31■■□□□ 1
SSU72-203ENST00000378725 BCAS3Q9H6U6 928 aa21.31■■□□□ 1
SSU72-203ENST00000378725 AGO4Q9HCK5 861 aaKnown RBP21.31■■□□□ 1
SSU72-203ENST00000378725 FRMPD3Q5JV73 1810 aa21.31■■□□□ 1
SSU72-203ENST00000378725 FAM205CA6NFA0 338 aa21.3■■□□□ 1
SSU72-203ENST00000378725 MOXD2PA6NHM9 499 aa21.3■■□□□ 1
SSU72-203ENST00000378725 ZEB2O60315 1214 aa21.3■■□□□ 1
SSU72-203ENST00000378725 CAPN15O75808 1086 aa21.3■■□□□ 1
SSU72-203ENST00000378725 MYCNP04198 464 aaPredicted RBP21.3■■□□□ 1
SSU72-203ENST00000378725 CPT1AP50416 773 aa21.3■■□□□ 1
SSU72-203ENST00000378725 SETQ01105 290 aaPredicted RBP21.3■■□□□ 1
SSU72-203ENST00000378725 Q4G0T1 1027 aa21.3■■□□□ 1
SSU72-203ENST00000378725 PPP4R3AQ6IN85 833 aa21.3■■□□□ 1
SSU72-203ENST00000378725 METTL7BQ6UX53 244 aa21.3■■□□□ 1
SSU72-203ENST00000378725 NECAB2Q7Z6G3 386 aa21.3■■□□□ 1
SSU72-203ENST00000378725 PPTC7Q8NI37 304 aa21.3■■□□□ 1
SSU72-203ENST00000378725 AFG1LQ8WV93 481 aa21.3■■□□□ 1
SSU72-203ENST00000378725 MLXIPQ9HAP2 919 aa21.3■■□□□ 1
SSU72-203ENST00000378725 ASGR1P07306 291 aa21.29■■□□□ 1
SSU72-203ENST00000378725 PDCP20941 246 aa21.29■■□□□ 1
SSU72-203ENST00000378725 ACLYP53396 1101 aa21.29■■□□□ 1
SSU72-203ENST00000378725 PRR16Q569H4 304 aa21.29■■□□□ 1
SSU72-203ENST00000378725 CYFIP1Q7L576 1253 aa21.29■■□□□ 1
SSU72-203ENST00000378725 NAP1L4Q99733 375 aaKnown RBP21.29■■□□□ 1
SSU72-203ENST00000378725 C11orf49Q9H6J7 331 aa21.29■■□□□ 1
SSU72-203ENST00000378725 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
SSU72-203ENST00000378725 NFASCO94856 1347 aa21.29■■□□□ 1
SSU72-203ENST00000378725 KIAA0100Q14667 2235 aaKnown RBP21.28■■□□□ 1
SSU72-203ENST00000378725 KIF28PB7ZC32 967 aa21.28■■□□□ 1
SSU72-203ENST00000378725 H3BQV1 296 aa21.28■■□□□ 1
SSU72-203ENST00000378725 KPNA6O60684 536 aa21.28■■□□□ 1
SSU72-203ENST00000378725 TDP2O95551 362 aa21.28■■□□□ 1
SSU72-203ENST00000378725 HOXD8P13378 290 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms