RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 GCFC2P16383 781 aaKnown RBP10.69□□□□□ -0.7
TRIM39-202ENST00000376659 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
TRIM39-202ENST00000376659 SEPT2Q15019 361 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 QRICH1Q2TAL8 776 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 NCAPH2Q6IBW4 605 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 CEP112Q8N8E3 955 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 GANQ9H2C0 597 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 SH2D4AQ9H788 454 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 SLC16A2P36021 539 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 SCNN1DP51172 638 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 MCCD1P59942 119 aaPredicted RBP10.68□□□□□ -0.7
TRIM39-202ENST00000376659 ASIC1P78348 528 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 KCTD1Q719H9 257 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 TRIM59Q8IWR1 403 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 IQCDQ96DY2 449 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 BORCS6Q96GS4 357 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 MMS19Q96T76 1030 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 GPCPD1Q9NPB8 672 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 MYO6Q9UM54 1294 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 SYNPO2Q9UMS6 1093 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 ATP8B3O60423 1300 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CYP11B2P19099 503 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CIITAP33076 1130 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 BMT2Q1RMZ1 405 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 KIF4BQ2VIQ3 1234 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 B3GNT9Q6UX72 402 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 SV2BQ7L1I2 683 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CREG2Q8IUH2 290 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CNPY4Q8N129 248 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CUL5Q93034 780 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 NDST4Q9H3R1 872 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 LUC7L2Q9Y383 392 aaKnown RBP10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CAPN6Q9Y6Q1 641 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 ANO9A1A5B4 782 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 YDJCA8MPS7 323 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 EEF2P13639 858 aaKnown RBP10.68□□□□□ -0.7
TRIM39-202ENST00000376659 USP11P51784 963 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CASP5P51878 434 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 MAN2A1Q16706 1144 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 STRIP1Q5VSL9 837 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 KRT27Q7Z3Y8 459 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 CREBRFQ8IUR6 639 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 EEF2KMTQ96G04 330 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 FIZ1Q96SL8 496 aa10.68□□□□□ -0.7
TRIM39-202ENST00000376659 FAM86B1E9PN63 330 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 CYP3A4P08684 503 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 FAM86B2P0C5J1 330 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-202ENST00000376659 SREBF1P36956 1147 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 VAV2P52735 878 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 PDXDC1Q6P996 788 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 MNS1Q8NEH6 495 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 MASTLQ96GX5 879 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 SUGCTQ9HAC7 445 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 ITIH3Q06033 890 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 STYK1Q6J9G0 422 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 TEKT1Q969V4 418 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 PITPNM2Q9BZ72 1349 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 NPHP3-ACAD11A0A0J9YXS1 232 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 AARSP49588 968 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRIM39-202ENST00000376659 USP14P54578 494 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 TEX35Q5T0J7 233 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 FAM114A1Q8IWE2 563 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 SNX29Q8TEQ0 813 aa10.67□□□□□ -0.7
TRIM39-202ENST00000376659 SYN2Q92777 582 aaPredicted RBP10.67□□□□□ -0.7
TRIM39-202ENST00000376659 BCCIPQ9P287 314 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRIM39-202ENST00000376659 KIAA1217Q5T5P2 1943 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 C6orf229H3BNL8 230 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 TAL1P17542 331 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 STIM1Q13586 685 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 NOC4LQ9BVI4 516 aaKnown RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 EDEM3Q9BZQ6 932 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 BCAS3Q9H6U6 928 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 SIX2Q9NPC8 291 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 PUF60Q9UHX1 559 aaKnown RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 ASTN1O14525 1302 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 PTPRFP10586 1907 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 TARSL2A2RTX5 802 aaKnown RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 LRRC53A6NM62 1247 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 LRRIQ3A6PVS8 624 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
TRIM39-202ENST00000376659 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms