RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 RTKN2Q8IZC4 609 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 TRIML1Q8N9V2 468 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 PPFIBP2Q8ND30 876 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 BANK1Q8NDB2 785 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 MAP3K4Q9Y6R4 1608 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 PSDA5PKW4 1024 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 NOL3O60936 208 aaKnown RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 PPP6R2O75170 966 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 ATF2P15336 505 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 EN1Q05925 392 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 PNMA8AQ86V59 439 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 SAMSN1Q9NSI8 373 aaKnown RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 MINPP1Q9UNW1 487 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 BZW2Q9Y6E2 419 aaKnown RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 EPN1Q9Y6I3 576 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 ZHX2Q9Y6X8 837 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 COL15A1P39059 1388 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 PLA2G4BP0C869 781 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 KIAA1841Q6NSI8 718 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
PTPRK-207ENST00000368226 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
PTPRK-207ENST00000368226 BNIP3LO60238 219 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
PTPRK-207ENST00000368226 CCNYQ8ND76 341 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 WRNIP1Q96S55 665 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 ABCF3Q9NUQ8 709 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 CDC42BPGQ6DT37 1551 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 IGKV5-2P06315 115 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 YWHAGP61981 247 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTPRK-207ENST00000368226 RNF207Q6ZRF8 634 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 NACC1Q96RE7 527 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 PLCB1Q9NQ66 1216 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 PYCARDQ9ULZ3 195 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 ABCC12Q96J65 1359 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 CYP2E1P05181 493 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-207ENST00000368226 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 ABCB11O95342 1321 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 SPATA31E1Q6ZUB1 1445 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 POC1B-GALNT4F8VUJ3 575 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 CASP1P29466 404 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 SARNPP82979 210 aaKnown RBP14.04□□□□□ -0.16
PTPRK-207ENST00000368226 CABS1Q96KC9 395 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 POLR2BP30876 1174 aaKnown RBP14.04□□□□□ -0.16
PTPRK-207ENST00000368226 MCUQ8NE86 351 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 MYRIPQ8NFW9 859 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-207ENST00000368226 GRK7Q8WTQ7 553 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 WDR11Q9BZH6 1224 aa14.04□□□□□ -0.16
PTPRK-207ENST00000368226 H7C1W4 665 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 TXNDC9O14530 226 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 GSTA1P08263 222 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 GSTA2P09210 222 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 GUCY2DQ02846 1103 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 NFX1Q12986 1120 aaKnown RBP14.03□□□□□ -0.16
PTPRK-207ENST00000368226 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 PNMA6FA0A0J9YX94 578 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 LAD1O00515 517 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 PSAPP07602 524 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 MAPK4P31152 587 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 TRIP13Q15645 432 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-207ENST00000368226 RINT1Q6NUQ1 792 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 PPP1R12CQ9BZL4 782 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 FTCDO95954 541 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 METTL23Q86XA0 190 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 SLC38A10Q9HBR0 1119 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
PTPRK-207ENST00000368226 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
PTPRK-207ENST00000368226 SEPT2Q15019 361 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 PLCB4Q15147 1175 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 ZNF658Q5TYW1 1059 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-207ENST00000368226 TRMT2AQ8IZ69 625 aaKnown RBP14.03□□□□□ -0.16
PTPRK-207ENST00000368226 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 ACRBPQ8NEB7 543 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 CHD1O14646 1710 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 MYO1FO00160 1098 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 MOCS3O95396 460 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 PEX3P56589 373 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 GPSM2P81274 684 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 LINC00301Q8NCQ3 95 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 EMILIN3Q9NT22 766 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L15C9J2P7 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L13C9JLJ4 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L11C9JVI0 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L18D6R9N7 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L22D6RA61 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L17D6RBQ6 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L19D6RCP7 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L20D6RJB6 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 ECE1P42892 770 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L24Q0WX57 530 aa14.02□□□□□ -0.16
PTPRK-207ENST00000368226 WHAMMP3Q1A5X7 153 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms