RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
PARP1-201ENST00000366790 CTCFLQ8NI51 663 aaPredicted RBP12.03□□□□□ -0.48
PARP1-201ENST00000366790 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
PARP1-201ENST00000366790 NKX2-4Q9H2Z4 354 aa12.03□□□□□ -0.48
PARP1-201ENST00000366790 SPTBN5Q9NRC6 3674 aaKnown RBP12.03□□□□□ -0.48
PARP1-201ENST00000366790 ZBBXA8MT70 800 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 SH2B2O14492 632 aaPredicted RBP12.02□□□□□ -0.49
PARP1-201ENST00000366790 PRC1O43663 620 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 GGPS1O95749 300 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 CXCL10P02778 98 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 SELPP16109 830 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 UBA1P22314 1058 aaKnown RBP12.02□□□□□ -0.49
PARP1-201ENST00000366790 SP2Q02086 613 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 PTK7Q13308 1070 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 MFSD10Q14728 455 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 HSDL1Q3SXM5 330 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 C7orf31Q8N865 590 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 PPP1R13LQ8WUF5 828 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 DHX38Q92620 1227 aaKnown RBP12.02□□□□□ -0.49
PARP1-201ENST00000366790 RRP36Q96EU6 259 aaKnown RBP12.02□□□□□ -0.49
PARP1-201ENST00000366790 SPATA33Q96N06 139 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
PARP1-201ENST00000366790 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
PARP1-201ENST00000366790 PRRC2BQ5JSZ5 2229 aaKnown RBP12.02□□□□□ -0.49
PARP1-201ENST00000366790 PTPRSQ13332 1948 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 SLC27A2O14975 620 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 CALM1P0DP23 149 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 CALM2P0DP24 149 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 CALM3P0DP25 149 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 HOXC8P31273 242 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 RABGGTBP53611 331 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 MRPS9P82933 396 aaKnown RBP12.01□□□□□ -0.49
PARP1-201ENST00000366790 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 NEDD9Q14511 834 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 GPNMBQ14956 572 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 TRIM71Q2Q1W2 868 aaKnown RBP12.01□□□□□ -0.49
PARP1-201ENST00000366790 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 PPP2R2DQ66LE6 453 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 LRRC8DQ7L1W4 858 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 FCHSD1Q86WN1 690 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 USP38Q8NB14 1042 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 SENP7Q9BQF6 1050 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 C16orf70Q9BSU1 422 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
PARP1-201ENST00000366790 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
PARP1-201ENST00000366790 CCDC69A6NI79 296 aa12□□□□□ -0.49
PARP1-201ENST00000366790 SPATA31C2B4DYI2 1134 aa12□□□□□ -0.49
PARP1-201ENST00000366790 MEIS2O14770 477 aa12□□□□□ -0.49
PARP1-201ENST00000366790 FIBPO43427 364 aa12□□□□□ -0.49
PARP1-201ENST00000366790 ZNF286BP0CG31 522 aa12□□□□□ -0.49
PARP1-201ENST00000366790 CKBP12277 381 aa12□□□□□ -0.49
PARP1-201ENST00000366790 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
PARP1-201ENST00000366790 CHMP4BP1P59074 171 aa12□□□□□ -0.49
PARP1-201ENST00000366790 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
PARP1-201ENST00000366790 CNKSR3Q6P9H4 555 aa12□□□□□ -0.49
PARP1-201ENST00000366790 METTL7BQ6UX53 244 aa12□□□□□ -0.49
PARP1-201ENST00000366790 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
PARP1-201ENST00000366790 SRBD1Q8N5C6 995 aaKnown RBP12□□□□□ -0.49
PARP1-201ENST00000366790 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
PARP1-201ENST00000366790 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
PARP1-201ENST00000366790 CUL5Q93034 780 aa12□□□□□ -0.49
PARP1-201ENST00000366790 MYL10Q9BUA6 226 aa12□□□□□ -0.49
PARP1-201ENST00000366790 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
PARP1-201ENST00000366790 MLXIPQ9HAP2 919 aa12□□□□□ -0.49
PARP1-201ENST00000366790 SEC63Q9UGP8 760 aaKnown RBP12□□□□□ -0.49
PARP1-201ENST00000366790 KIF28PB7ZC32 967 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 EFCAB14O75071 495 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 MYOGP15173 224 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 SEMA3FQ13275 785 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 NFXL1Q6ZNB6 911 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
PARP1-201ENST00000366790 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 USP26Q9BXU7 913 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 SLC12A7Q9Y666 1083 aa11.99□□□□□ -0.49
PARP1-201ENST00000366790 BDP1A6H8Y1 2624 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 MICAL3Q7RTP6 2002 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 EMSYQ7Z589 1322 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 H3BRB1 525 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 NBNO60934 754 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 LGALS2P05162 132 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 CA3P07451 260 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
PARP1-201ENST00000366790 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
PARP1-201ENST00000366790 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 TJAP1Q5JTD0 557 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 RNF20Q5VTR2 975 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
PARP1-201ENST00000366790 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms