RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NIPA1Q7RTP0 329 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CDHR1Q96JP9 859 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 ATP6V1DQ9Y5K8 247 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 MEIS1O00470 390 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 WNT7AO00755 349 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 NEMFO60524 1076 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 TTLL4Q14679 1199 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 ZNF174Q15697 407 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 CCDC144BQ3MJ40 725 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 PDGFCQ9NRA1 345 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 KCNH7Q9NS40 1196 aa17.29■□□□□ 0.36
TPM1-206ENST00000358278 MYH9P35579 1960 aaKnown RBP17.28■□□□□ 0.36
TPM1-206ENST00000358278 SLC37A4O43826 429 aa17.28■□□□□ 0.36
TPM1-206ENST00000358278 ZNF865P0CJ78 1059 aaPredicted RBP17.28■□□□□ 0.36
TPM1-206ENST00000358278 ADCYAP1R1P41586 468 aa17.28■□□□□ 0.36
TPM1-206ENST00000358278 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
TPM1-206ENST00000358278 Q4G0T1 1027 aa17.28■□□□□ 0.36
TPM1-206ENST00000358278 TAPT1Q6NXT6 567 aa17.28■□□□□ 0.36
TPM1-206ENST00000358278 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
TPM1-206ENST00000358278 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
TPM1-206ENST00000358278 MAFGO15525 162 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 MARCH6O60337 910 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 MAP3K21Q5TCX8 1036 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 TRPV1Q8NER1 839 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 LENG9Q96B70 501 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 MBOAT7Q96N66 472 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.36
TPM1-206ENST00000358278 ZNF577Q9BSK1 485 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 PKD2L1Q9P0L9 805 aa17.27■□□□□ 0.36
TPM1-206ENST00000358278 SPATA31C2B4DYI2 1134 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 ARP10275 920 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 TXNP10599 105 aaKnown RBP17.27■□□□□ 0.35
TPM1-206ENST00000358278 TGFB3P10600 412 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 AKR1A1P14550 325 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 CCND3P30281 292 aaPredicted RBP17.27■□□□□ 0.35
TPM1-206ENST00000358278 ICAM3P32942 547 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 UIMC1Q96RL1 719 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 HMX1Q9NP08 348 aaPredicted RBP17.27■□□□□ 0.35
TPM1-206ENST00000358278 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.35
TPM1-206ENST00000358278 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.26■□□□□ 0.35
TPM1-206ENST00000358278 RBM47A0AV96 593 aaKnown RBP17.26■□□□□ 0.35
TPM1-206ENST00000358278 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
TPM1-206ENST00000358278 SEPT4O43236 478 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 ARIH2O95376 493 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 TNFAIP2Q03169 654 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
TPM1-206ENST00000358278 SEMA3FQ13275 785 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 CALCRLQ16602 461 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 LY6KQ17RY6 165 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 IQSEC1Q6DN90 963 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.26■□□□□ 0.35
TPM1-206ENST00000358278 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
TPM1-206ENST00000358278 KIAA0100Q14667 2235 aaKnown RBP17.26■□□□□ 0.35
TPM1-206ENST00000358278 MSH4O15457 936 aa17.25■□□□□ 0.35
TPM1-206ENST00000358278 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
TPM1-206ENST00000358278 MYCP01106 439 aaPredicted RBP17.25■□□□□ 0.35
TPM1-206ENST00000358278 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
TPM1-206ENST00000358278 SF3A1Q15459 793 aaKnown RBP17.25■□□□□ 0.35
TPM1-206ENST00000358278 USP28Q96RU2 1077 aa17.25■□□□□ 0.35
TPM1-206ENST00000358278 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
TPM1-206ENST00000358278 AGO4Q9HCK5 861 aaKnown RBP17.25■□□□□ 0.35
TPM1-206ENST00000358278 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
TPM1-206ENST00000358278 BMP15O95972 392 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
TPM1-206ENST00000358278 DNM1Q05193 864 aaKnown RBP17.24■□□□□ 0.35
TPM1-206ENST00000358278 PTGDRQ13258 359 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 DUSP28Q4G0W2 176 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 ANO1Q5XXA6 986 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 CCDC62Q6P9F0 684 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
TPM1-206ENST00000358278 ETNPPLQ8TBG4 499 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 SDF4Q9BRK5 362 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 TCEAL9Q9UHQ7 104 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 TBX3O15119 743 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■■□□□ 14
TPM1-206ENST00000358278 ADCY6O43306 1168 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 SORBS3O60504 671 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 GAS7O60861 476 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 ATP9AO75110 1047 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 OR52Z1P0C646 297 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 KCNA2P16389 499 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 SMPD1P17405 629 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 SP2Q02086 613 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 NEDD9Q14511 834 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 GJC2Q5T442 439 aaPredicted RBP17.24■□□□□ 0.35
TPM1-206ENST00000358278 LRCH2Q5VUJ6 765 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 ATL3Q6DD88 541 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 SLFN12Q8IYM2 578 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 LENG1Q96BZ8 264 aaPredicted RBP17.24■□□□□ 0.35
TPM1-206ENST00000358278 FAM20AQ96MK3 541 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 SENP7Q9BQF6 1050 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 TMEM60Q9H2L4 133 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
TPM1-206ENST00000358278 DNAH12Q6ZR08 3092 aa17.24■□□□□ 0.35
TPM1-206ENST00000358278 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms