RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NOD1Q9Y239 953 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 CCDC69A6NI79 296 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 HAS3O00219 553 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 RFXAPO00287 272 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 MEIS2O14770 477 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 UBA1P22314 1058 aaKnown RBP15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 CCND2P30279 289 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 MFSD10Q14728 455 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 KIAA0753Q2KHM9 967 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 TMCO2Q7Z6W1 182 aaPredicted RBP15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 EMID1Q96A84 441 aaPredicted RBP15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 COL25A1Q9BXS0 654 aaPredicted RBP15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 CHD9Q3L8U1 2897 aa15.45■□□□□ 0.06
NUDCD3-201ENST00000338427 TMEM265A0A087WTH1 108 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 DDAH1O94760 285 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 ARHGEF15O94989 841 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 CCDC85BQ15834 202 aaPredicted RBP15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 ADCK5Q3MIX3 580 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 C7orf31Q8N865 590 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 PPTC7Q8NI37 304 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 TMEM87BQ96K49 555 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 MAP3K14Q99558 947 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 C16orf70Q9BSU1 422 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 CERS4Q9HA82 394 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 MLXIPQ9HAP2 919 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 GTF2IRD1Q9UHL9 959 aa15.44■□□□□ 0.06
NUDCD3-201ENST00000338427 PPFIA4O75335 1185 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 CPA1P15085 419 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 ATP2A2P16615 1042 aaKnown RBP15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 BFSP2Q13515 415 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 UBE2SQ16763 222 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 CENPQQ7L2Z9 268 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 CYFIP1Q7L576 1253 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 SPRED2Q7Z698 418 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 SESTD1Q86VW0 696 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 SAMD3Q8N6K7 520 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 FANCBQ8NB91 859 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 OSBPL7Q9BZF2 842 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 MTIF3Q9H2K0 278 aaKnown RBP15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 GBF1Q92538 1859 aa15.43■□□□□ 0.06
NUDCD3-201ENST00000338427 SPATA31C2B4DYI2 1134 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 NBNO60934 754 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 ATP9AO75110 1047 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 F2P00734 622 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 CKBP12277 381 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 IGFBP4P22692 258 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 KIF5BP33176 963 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 LIFRP42702 1097 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 EXOSC10Q01780 885 aaKnown RBP15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 SP4Q02446 784 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 TRAF1Q13077 416 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 RAB30Q15771 203 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 TRIM71Q2Q1W2 868 aaKnown RBP15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 TRAF7Q6Q0C0 670 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 NEK1Q96PY6 1258 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
NUDCD3-201ENST00000338427 TGFB3P10600 412 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 HOXD8P13378 290 aaPredicted RBP15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 SELPP16109 830 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 SMARCA1P28370 1054 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 ZNF618Q5T7W0 954 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 KCNV1Q6PIU1 500 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 MICU3Q86XE3 530 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 INPP4AQ96PE3 977 aaPredicted RBP15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 LZTS2Q9BRK4 669 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 MTA3Q9BTC8 594 aa15.41■□□□□ 0.06
NUDCD3-201ENST00000338427 DOCK5Q9H7D0 1870 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 LGALS2P05162 132 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 ICAM3P32942 547 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 RFC2P35250 354 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 GNAQP50148 359 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 MBTPS1Q14703 1052 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 LRRC8DQ7L1W4 858 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 TRIM50Q86XT4 487 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 CUL5Q93034 780 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 GAS2L1Q99501 681 aaPredicted RBP15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 GPR20Q99678 358 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 RNPEPQ9H4A4 650 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 PSTPIP2Q9H939 334 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 PKD2L1Q9P0L9 805 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 SEC63Q9UGP8 760 aaKnown RBP15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 FRMPD4Q14CM0 1322 aa15.4■□□□□ 0.06
NUDCD3-201ENST00000338427 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 EPOPA6NHQ4 379 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 H3BRB1 525 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 TREHO43280 583 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 CA3P07451 260 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 PFKMP08237 780 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 ACTN1P12814 892 aa15.39■□□□□ 0.05
NUDCD3-201ENST00000338427 DEFB103AP81534 67 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms